Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 AC020765.3-201ENST00000613051 740 ntBASIC21.63■■□□□ 1.05
COL5A2P05997 MIR6787-201ENST00000616675 61 ntBASIC21.63■■□□□ 1.05
COL5A2P05997 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
COL5A2P05997 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC21.63■■□□□ 1.05
COL5A2P05997 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
COL5A2P05997 GPAA1P2-202ENST00000606848 1787 ntBASIC21.63■■□□□ 1.05
COL5A2P05997 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC21.63■■□□□ 1.05
COL5A2P05997 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
COL5A2P05997 CROCCP2-202ENST00000412962 2773 ntBASIC21.63■■□□□ 1.05
COL5A2P05997 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
COL5A2P05997 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
COL5A2P05997 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
COL5A2P05997 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
COL5A2P05997 GGT4P-201ENST00000623672 1708 ntBASIC21.62■■□□□ 1.05
COL5A2P05997 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
COL5A2P05997 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
COL5A2P05997 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
COL5A2P05997 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
COL5A2P05997 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
COL5A2P05997 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC21.62■■□□□ 1.05
COL5A2P05997 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC21.62■■□□□ 1.05
COL5A2P05997 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC21.62■■□□□ 1.05
COL5A2P05997 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
COL5A2P05997 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC21.62■■□□□ 1.05
COL5A2P05997 AC092068.3-201ENST00000587894 2016 ntBASIC21.62■■□□□ 1.05
COL5A2P05997 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC21.62■■□□□ 1.05
COL5A2P05997 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC21.62■■□□□ 1.05
COL5A2P05997 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
COL5A2P05997 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
COL5A2P05997 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
COL5A2P05997 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
COL5A2P05997 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
COL5A2P05997 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
COL5A2P05997 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
COL5A2P05997 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
COL5A2P05997 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
COL5A2P05997 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
COL5A2P05997 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
COL5A2P05997 AL583810.1-201ENST00000553344 1045 ntBASIC21.61■■□□□ 1.05
COL5A2P05997 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC21.61■■□□□ 1.05
COL5A2P05997 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC21.61■■□□□ 1.05
COL5A2P05997 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC21.61■■□□□ 1.05
COL5A2P05997 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC21.61■■□□□ 1.05
COL5A2P05997 AL158212.4-201ENST00000624062 1286 ntBASIC21.61■■□□□ 1.05
COL5A2P05997 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
COL5A2P05997 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
COL5A2P05997 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC21.61■■□□□ 1.05
COL5A2P05997 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
COL5A2P05997 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC21.61■■□□□ 1.05
COL5A2P05997 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
COL5A2P05997 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
COL5A2P05997 AL031731.1-201ENST00000642131 2094 ntBASIC21.61■■□□□ 1.05
COL5A2P05997 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
COL5A2P05997 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
COL5A2P05997 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
COL5A2P05997 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC21.6■■□□□ 1.05
COL5A2P05997 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
COL5A2P05997 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC21.6■■□□□ 1.05
COL5A2P05997 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
COL5A2P05997 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC21.6■■□□□ 1.05
COL5A2P05997 AC099336.1-201ENST00000417053 1171 ntBASIC21.6■■□□□ 1.05
COL5A2P05997 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC21.6■■□□□ 1.05
COL5A2P05997 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC21.6■■□□□ 1.05
COL5A2P05997 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
COL5A2P05997 KRT43P-201ENST00000434019 910 ntBASIC21.6■■□□□ 1.05
COL5A2P05997 KRT8P44-201ENST00000441609 1350 ntBASIC21.6■■□□□ 1.05
COL5A2P05997 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC21.6■■□□□ 1.05
COL5A2P05997 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC21.6■■□□□ 1.05
COL5A2P05997 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC21.6■■□□□ 1.05
COL5A2P05997 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC21.6■■□□□ 1.05
COL5A2P05997 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC21.6■■□□□ 1.05
COL5A2P05997 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
COL5A2P05997 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
COL5A2P05997 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
COL5A2P05997 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC21.6■■□□□ 1.05
COL5A2P05997 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC21.6■■□□□ 1.05
COL5A2P05997 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
COL5A2P05997 CYP4F24P-201ENST00000586049 1580 ntBASIC21.6■■□□□ 1.05
COL5A2P05997 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
COL5A2P05997 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC21.6■■□□□ 1.05
COL5A2P05997 BTNL10-201ENST00000595971 695 ntBASIC21.6■■□□□ 1.05
COL5A2P05997 RELA-227ENST00000615805 2236 ntTSL 5 BASIC21.6■■□□□ 1.05
COL5A2P05997 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
COL5A2P05997 PFAS-212ENST00000625942 396 ntTSL 5 BASIC21.6■■□□□ 1.05
COL5A2P05997 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC21.6■■□□□ 1.05
COL5A2P05997 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
COL5A2P05997 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
COL5A2P05997 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
COL5A2P05997 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
COL5A2P05997 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
COL5A2P05997 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
COL5A2P05997 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC21.6■■□□□ 1.05
COL5A2P05997 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
COL5A2P05997 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
COL5A2P05997 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC21.59■■□□□ 1.05
COL5A2P05997 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
COL5A2P05997 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
COL5A2P05997 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
COL5A2P05997 AC093525.8-201ENST00000624099 1342 ntBASIC21.59■■□□□ 1.05
COL5A2P05997 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms