Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HLA-DPB1P04440 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HLA-DPB1P04440 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
HLA-DPB1P04440 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC15.1■□□□□ 0.01
HLA-DPB1P04440 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HLA-DPB1P04440 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
HLA-DPB1P04440 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
HLA-DPB1P04440 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HLA-DPB1P04440 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC15.1■□□□□ 0.01
HLA-DPB1P04440 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
HLA-DPB1P04440 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
HLA-DPB1P04440 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
HLA-DPB1P04440 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
HLA-DPB1P04440 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
HLA-DPB1P04440 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
HLA-DPB1P04440 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC15.09■□□□□ 0.01
HLA-DPB1P04440 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
HLA-DPB1P04440 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HLA-DPB1P04440 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
HLA-DPB1P04440 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
HLA-DPB1P04440 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HLA-DPB1P04440 AC005052.1-201ENST00000625181 2492 ntBASIC15.09■□□□□ 0.01
HLA-DPB1P04440 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HLA-DPB1P04440 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC15.09■□□□□ 0.01
HLA-DPB1P04440 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC15.09■□□□□ 0.01
HLA-DPB1P04440 FLJ16779-201ENST00000612722 7638 ntBASIC15.09■□□□□ 0.01
HLA-DPB1P04440 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
HLA-DPB1P04440 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC15.09■□□□□ 0.01
HLA-DPB1P04440 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HLA-DPB1P04440 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC15.09■□□□□ 0.01
HLA-DPB1P04440 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC15.09■□□□□ 0.01
HLA-DPB1P04440 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC15.09■□□□□ 0.01
HLA-DPB1P04440 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HLA-DPB1P04440 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC15.09■□□□□ 0.01
HLA-DPB1P04440 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
HLA-DPB1P04440 IGHV3-47-201ENST00000425060 335 ntBASIC15.09■□□□□ 0.01
HLA-DPB1P04440 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC15.09■□□□□ 0.01
HLA-DPB1P04440 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC15.09■□□□□ 0.01
HLA-DPB1P04440 AC111152.3-201ENST00000569699 673 ntBASIC15.09■□□□□ 0.01
HLA-DPB1P04440 METTL23-204ENST00000586752 904 ntTSL 2 BASIC15.09■□□□□ 0.01
HLA-DPB1P04440 AC099336.1-202ENST00000602961 463 ntBASIC15.09■□□□□ 0.01
HLA-DPB1P04440 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC15.09■□□□□ 0.01
HLA-DPB1P04440 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
HLA-DPB1P04440 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC15.09■□□□□ 0.01
HLA-DPB1P04440 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC15.09■□□□□ 0.01
HLA-DPB1P04440 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC15.09■□□□□ 0.01
HLA-DPB1P04440 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
HLA-DPB1P04440 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HLA-DPB1P04440 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HLA-DPB1P04440 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
HLA-DPB1P04440 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC15.09■□□□□ 0.01
HLA-DPB1P04440 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC15.09■□□□□ 0.01
HLA-DPB1P04440 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
HLA-DPB1P04440 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
HLA-DPB1P04440 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
HLA-DPB1P04440 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
HLA-DPB1P04440 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
HLA-DPB1P04440 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC15.09■□□□□ 0.01
HLA-DPB1P04440 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HLA-DPB1P04440 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC15.09■□□□□ 0.01
HLA-DPB1P04440 AC067930.6-201ENST00000623257 4947 ntBASIC15.09■□□□□ 0.01
HLA-DPB1P04440 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
HLA-DPB1P04440 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
HLA-DPB1P04440 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
HLA-DPB1P04440 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
HLA-DPB1P04440 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
HLA-DPB1P04440 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
HLA-DPB1P04440 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
HLA-DPB1P04440 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
HLA-DPB1P04440 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0.01
HLA-DPB1P04440 VILL-207ENST00000465644 1857 ntTSL 5 BASIC15.08■□□□□ 0.01
HLA-DPB1P04440 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
HLA-DPB1P04440 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC15.08■□□□□ 0
HLA-DPB1P04440 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC15.08■□□□□ 0
HLA-DPB1P04440 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
HLA-DPB1P04440 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC15.08■□□□□ 0
HLA-DPB1P04440 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC15.08■□□□□ 0
HLA-DPB1P04440 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
HLA-DPB1P04440 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC15.08■□□□□ 0
HLA-DPB1P04440 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
HLA-DPB1P04440 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
HLA-DPB1P04440 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
HLA-DPB1P04440 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
HLA-DPB1P04440 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0
HLA-DPB1P04440 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC15.08■□□□□ 0
HLA-DPB1P04440 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC15.08■□□□□ 0
HLA-DPB1P04440 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
HLA-DPB1P04440 HLA-J-202ENST00000469281 1241 ntBASIC15.08■□□□□ 0
HLA-DPB1P04440 AC096582.2-201ENST00000510860 516 ntBASIC15.08■□□□□ 0
HLA-DPB1P04440 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC15.08■□□□□ 0
HLA-DPB1P04440 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC15.08■□□□□ 0
HLA-DPB1P04440 AC012615.1-201ENST00000565797 1299 ntBASIC15.08■□□□□ 0
HLA-DPB1P04440 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC15.08■□□□□ 0
HLA-DPB1P04440 BLK-205ENST00000529894 2017 ntTSL 5 BASIC15.08■□□□□ 0
HLA-DPB1P04440 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC15.08■□□□□ 0
HLA-DPB1P04440 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC15.08■□□□□ 0
HLA-DPB1P04440 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC15.08■□□□□ 0
HLA-DPB1P04440 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC15.08■□□□□ 0
HLA-DPB1P04440 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC15.08■□□□□ 0
HLA-DPB1P04440 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC15.08■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms