Protein–RNA interactions for Protein: P04350

TUBB4A, Tubulin beta-4A chain, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4AP04350 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
TUBB4AP04350 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
TUBB4AP04350 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
TUBB4AP04350 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TUBB4AP04350 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TUBB4AP04350 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TUBB4AP04350 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TUBB4AP04350 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
TUBB4AP04350 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TUBB4AP04350 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TUBB4AP04350 FAM8A6P-201ENST00000407496 1135 ntBASIC17.96■□□□□ 0.47
TUBB4AP04350 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
TUBB4AP04350 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC17.96■□□□□ 0.47
TUBB4AP04350 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TUBB4AP04350 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC17.96■□□□□ 0.47
TUBB4AP04350 SNX21-213ENST00000614929 587 ntTSL 5 BASIC17.96■□□□□ 0.47
TUBB4AP04350 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
TUBB4AP04350 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
TUBB4AP04350 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TUBB4AP04350 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
TUBB4AP04350 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TUBB4AP04350 AC125634.1-201ENST00000438758 1403 ntBASIC17.96■□□□□ 0.47
TUBB4AP04350 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
TUBB4AP04350 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TUBB4AP04350 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
TUBB4AP04350 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TUBB4AP04350 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
TUBB4AP04350 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
TUBB4AP04350 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
TUBB4AP04350 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
TUBB4AP04350 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC17.95■□□□□ 0.46
TUBB4AP04350 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC17.95■□□□□ 0.46
TUBB4AP04350 LINC01144-201ENST00000626198 1710 ntBASIC17.95■□□□□ 0.46
TUBB4AP04350 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TUBB4AP04350 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
TUBB4AP04350 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC17.95■□□□□ 0.46
TUBB4AP04350 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
TUBB4AP04350 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
TUBB4AP04350 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
TUBB4AP04350 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
TUBB4AP04350 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC17.95■□□□□ 0.46
TUBB4AP04350 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TUBB4AP04350 ACTG1P4-201ENST00000425123 1122 ntBASIC17.95■□□□□ 0.46
TUBB4AP04350 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC17.95■□□□□ 0.46
TUBB4AP04350 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TUBB4AP04350 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
TUBB4AP04350 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC17.95■□□□□ 0.46
TUBB4AP04350 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC17.95■□□□□ 0.46
TUBB4AP04350 GCSHP2-201ENST00000560971 527 ntBASIC17.95■□□□□ 0.46
TUBB4AP04350 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
TUBB4AP04350 AP000525.1-201ENST00000608286 694 ntBASIC17.95■□□□□ 0.46
TUBB4AP04350 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC17.95■□□□□ 0.46
TUBB4AP04350 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TUBB4AP04350 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
TUBB4AP04350 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
TUBB4AP04350 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC17.95■□□□□ 0.46
TUBB4AP04350 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
TUBB4AP04350 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
TUBB4AP04350 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
TUBB4AP04350 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TUBB4AP04350 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC17.95■□□□□ 0.46
TUBB4AP04350 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
TUBB4AP04350 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
TUBB4AP04350 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TUBB4AP04350 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TUBB4AP04350 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
TUBB4AP04350 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TUBB4AP04350 SSR4P1-203ENST00000599569 2260 ntBASIC17.95■□□□□ 0.46
TUBB4AP04350 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC17.95■□□□□ 0.46
TUBB4AP04350 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TUBB4AP04350 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TUBB4AP04350 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TUBB4AP04350 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
TUBB4AP04350 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
TUBB4AP04350 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TUBB4AP04350 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TUBB4AP04350 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TUBB4AP04350 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
TUBB4AP04350 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC17.94■□□□□ 0.46
TUBB4AP04350 SLC9A7P1-201ENST00000554295 3311 ntBASIC17.94■□□□□ 0.46
TUBB4AP04350 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
TUBB4AP04350 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TUBB4AP04350 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TUBB4AP04350 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TUBB4AP04350 INGX-201ENST00000359239 846 ntBASIC17.94■□□□□ 0.46
TUBB4AP04350 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
TUBB4AP04350 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TUBB4AP04350 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
TUBB4AP04350 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
TUBB4AP04350 ECEL1P3-201ENST00000427961 737 ntBASIC17.94■□□□□ 0.46
TUBB4AP04350 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC17.94■□□□□ 0.46
TUBB4AP04350 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
TUBB4AP04350 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC17.94■□□□□ 0.46
TUBB4AP04350 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
TUBB4AP04350 AL355075.4-201ENST00000554988 638 ntBASIC17.94■□□□□ 0.46
TUBB4AP04350 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC17.94■□□□□ 0.46
TUBB4AP04350 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC17.94■□□□□ 0.46
TUBB4AP04350 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC17.94■□□□□ 0.46
TUBB4AP04350 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
TUBB4AP04350 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms