Protein–RNA interactions for Protein: O75427

LRCH4, Leucine-rich repeat and calponin homology domain-containing protein 4, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4O75427 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC17.38■□□□□ 0.37
LRCH4O75427 AC145285.3-201ENST00000564603 959 ntBASIC17.38■□□□□ 0.37
LRCH4O75427 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
LRCH4O75427 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
LRCH4O75427 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC17.38■□□□□ 0.37
LRCH4O75427 AC010507.1-201ENST00000633895 436 ntBASIC17.38■□□□□ 0.37
LRCH4O75427 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LRCH4O75427 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
LRCH4O75427 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LRCH4O75427 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LRCH4O75427 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LRCH4O75427 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
LRCH4O75427 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC17.38■□□□□ 0.37
LRCH4O75427 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC17.37■□□□□ 0.37
LRCH4O75427 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LRCH4O75427 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC17.37■□□□□ 0.37
LRCH4O75427 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
LRCH4O75427 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC17.37■□□□□ 0.37
LRCH4O75427 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC17.37■□□□□ 0.37
LRCH4O75427 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LRCH4O75427 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC17.37■□□□□ 0.37
LRCH4O75427 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
LRCH4O75427 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
LRCH4O75427 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
LRCH4O75427 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LRCH4O75427 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
LRCH4O75427 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
LRCH4O75427 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LRCH4O75427 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC17.37■□□□□ 0.37
LRCH4O75427 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
LRCH4O75427 AL513480.1-201ENST00000451731 511 ntBASIC17.37■□□□□ 0.37
LRCH4O75427 AC079776.4-201ENST00000511039 504 ntBASIC17.37■□□□□ 0.37
LRCH4O75427 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC17.37■□□□□ 0.37
LRCH4O75427 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
LRCH4O75427 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
LRCH4O75427 AC034105.1-201ENST00000563488 319 ntBASIC17.37■□□□□ 0.37
LRCH4O75427 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
LRCH4O75427 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC17.37■□□□□ 0.37
LRCH4O75427 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
LRCH4O75427 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
LRCH4O75427 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LRCH4O75427 BANP-204ENST00000393208 2283 ntTSL 2 BASIC17.37■□□□□ 0.37
LRCH4O75427 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
LRCH4O75427 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
LRCH4O75427 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC17.37■□□□□ 0.37
LRCH4O75427 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LRCH4O75427 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LRCH4O75427 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.37■□□□□ 0.37
LRCH4O75427 PCGF3-213ENST00000620529 1899 ntBASIC17.37■□□□□ 0.37
LRCH4O75427 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
LRCH4O75427 AC104109.2-201ENST00000602919 1418 ntBASIC17.37■□□□□ 0.37
LRCH4O75427 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LRCH4O75427 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
LRCH4O75427 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
LRCH4O75427 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
LRCH4O75427 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LRCH4O75427 AL391005.1-201ENST00000623953 2435 ntBASIC17.37■□□□□ 0.37
LRCH4O75427 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
LRCH4O75427 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LRCH4O75427 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC17.37■□□□□ 0.37
LRCH4O75427 AC026691.1-201ENST00000602502 2017 ntBASIC17.37■□□□□ 0.37
LRCH4O75427 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
LRCH4O75427 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC17.36■□□□□ 0.37
LRCH4O75427 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC17.36■□□□□ 0.37
LRCH4O75427 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LRCH4O75427 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LRCH4O75427 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LRCH4O75427 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LRCH4O75427 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
LRCH4O75427 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
LRCH4O75427 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
LRCH4O75427 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LRCH4O75427 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
LRCH4O75427 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC17.36■□□□□ 0.37
LRCH4O75427 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LRCH4O75427 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC17.36■□□□□ 0.37
LRCH4O75427 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC17.36■□□□□ 0.37
LRCH4O75427 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LRCH4O75427 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
LRCH4O75427 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC17.36■□□□□ 0.37
LRCH4O75427 RNU1-129P-201ENST00000384064 167 ntBASIC17.36■□□□□ 0.37
LRCH4O75427 DDT-204ENST00000404092 805 ntTSL 3 BASIC17.36■□□□□ 0.37
LRCH4O75427 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
LRCH4O75427 RHOQP3-201ENST00000437982 621 ntBASIC17.36■□□□□ 0.37
LRCH4O75427 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
LRCH4O75427 AC096734.2-201ENST00000562054 433 ntBASIC17.36■□□□□ 0.37
LRCH4O75427 U1.21-201ENST00000580816 167 ntBASIC17.36■□□□□ 0.37
LRCH4O75427 KLK8-205ENST00000593490 267 ntTSL 3 BASIC17.36■□□□□ 0.37
LRCH4O75427 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC17.36■□□□□ 0.37
LRCH4O75427 AL645728.2-201ENST00000641974 660 ntBASIC17.36■□□□□ 0.37
LRCH4O75427 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LRCH4O75427 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LRCH4O75427 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LRCH4O75427 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LRCH4O75427 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
LRCH4O75427 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
LRCH4O75427 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LRCH4O75427 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LRCH4O75427 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.36■□□□□ 0.37
LRCH4O75427 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms