Protein–RNA interactions for Protein: O60264

SMARCA5, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5, humanhuman

Predicted RBP Predictions only

Length 1,052 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5O60264 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
SMARCA5O60264 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SMARCA5O60264 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SMARCA5O60264 GGT3P-204ENST00000453783 1664 ntBASIC20.61■□□□□ 0.89
SMARCA5O60264 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SMARCA5O60264 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC20.61■□□□□ 0.89
SMARCA5O60264 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
SMARCA5O60264 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SMARCA5O60264 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC20.61■□□□□ 0.89
SMARCA5O60264 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC20.61■□□□□ 0.89
SMARCA5O60264 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
SMARCA5O60264 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SMARCA5O60264 AC006449.5-201ENST00000610658 2098 ntBASIC20.61■□□□□ 0.89
SMARCA5O60264 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
SMARCA5O60264 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
SMARCA5O60264 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC20.61■□□□□ 0.89
SMARCA5O60264 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC20.61■□□□□ 0.89
SMARCA5O60264 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
SMARCA5O60264 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
SMARCA5O60264 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
SMARCA5O60264 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC20.61■□□□□ 0.89
SMARCA5O60264 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
SMARCA5O60264 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SMARCA5O60264 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SMARCA5O60264 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SMARCA5O60264 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC20.6■□□□□ 0.89
SMARCA5O60264 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC20.6■□□□□ 0.89
SMARCA5O60264 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SMARCA5O60264 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC20.6■□□□□ 0.89
SMARCA5O60264 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SMARCA5O60264 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SMARCA5O60264 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC20.6■□□□□ 0.89
SMARCA5O60264 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SMARCA5O60264 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SMARCA5O60264 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SMARCA5O60264 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC20.6■□□□□ 0.89
SMARCA5O60264 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
SMARCA5O60264 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
SMARCA5O60264 MED15P5-201ENST00000423150 992 ntBASIC20.6■□□□□ 0.89
SMARCA5O60264 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC20.6■□□□□ 0.89
SMARCA5O60264 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC20.6■□□□□ 0.89
SMARCA5O60264 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC20.6■□□□□ 0.89
SMARCA5O60264 KRT19P2-202ENST00000557173 1012 ntBASIC20.6■□□□□ 0.89
SMARCA5O60264 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SMARCA5O60264 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC20.6■□□□□ 0.89
SMARCA5O60264 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SMARCA5O60264 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC20.6■□□□□ 0.89
SMARCA5O60264 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC20.6■□□□□ 0.89
SMARCA5O60264 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC20.6■□□□□ 0.89
SMARCA5O60264 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SMARCA5O60264 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC20.6■□□□□ 0.89
SMARCA5O60264 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
SMARCA5O60264 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
SMARCA5O60264 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SMARCA5O60264 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC20.6■□□□□ 0.89
SMARCA5O60264 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC20.59■□□□□ 0.89
SMARCA5O60264 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SMARCA5O60264 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
SMARCA5O60264 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
SMARCA5O60264 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
SMARCA5O60264 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC20.59■□□□□ 0.89
SMARCA5O60264 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SMARCA5O60264 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
SMARCA5O60264 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
SMARCA5O60264 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SMARCA5O60264 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SMARCA5O60264 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SMARCA5O60264 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC20.59■□□□□ 0.89
SMARCA5O60264 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SMARCA5O60264 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SMARCA5O60264 MIR574-201ENST00000385209 96 ntBASIC20.59■□□□□ 0.89
SMARCA5O60264 AC023274.1-201ENST00000418278 595 ntBASIC20.59■□□□□ 0.89
SMARCA5O60264 KRT18P3-201ENST00000451602 1288 ntBASIC20.59■□□□□ 0.89
SMARCA5O60264 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC20.59■□□□□ 0.89
SMARCA5O60264 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC20.59■□□□□ 0.89
SMARCA5O60264 POLD2P1-201ENST00000511220 997 ntBASIC20.59■□□□□ 0.89
SMARCA5O60264 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SMARCA5O60264 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC20.59■□□□□ 0.89
SMARCA5O60264 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SMARCA5O60264 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SMARCA5O60264 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SMARCA5O60264 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
SMARCA5O60264 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC20.59■□□□□ 0.89
SMARCA5O60264 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC20.59■□□□□ 0.89
SMARCA5O60264 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
SMARCA5O60264 AC018695.7-201ENST00000624587 2492 ntBASIC20.59■□□□□ 0.89
SMARCA5O60264 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC20.59■□□□□ 0.89
SMARCA5O60264 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
SMARCA5O60264 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SMARCA5O60264 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC20.58■□□□□ 0.89
SMARCA5O60264 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
SMARCA5O60264 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC20.58■□□□□ 0.89
SMARCA5O60264 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
SMARCA5O60264 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC20.58■□□□□ 0.89
SMARCA5O60264 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SMARCA5O60264 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
SMARCA5O60264 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC20.58■□□□□ 0.89
SMARCA5O60264 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC20.58■□□□□ 0.89
SMARCA5O60264 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SMARCA5O60264 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms