Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 NF2-208ENST00000403435 2568 ntTSL 5 BASIC18.78■□□□□ 0.6
CHMP2AO43633 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHMP2AO43633 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHMP2AO43633 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
CHMP2AO43633 ADH5P3-201ENST00000433842 1137 ntBASIC18.78■□□□□ 0.6
CHMP2AO43633 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC18.78■□□□□ 0.6
CHMP2AO43633 AP006288.1-201ENST00000446065 395 ntBASIC18.78■□□□□ 0.6
CHMP2AO43633 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC18.78■□□□□ 0.6
CHMP2AO43633 AP002490.2-201ENST00000524791 560 ntBASIC18.78■□□□□ 0.6
CHMP2AO43633 AC109635.5-201ENST00000533593 962 ntBASIC18.78■□□□□ 0.6
CHMP2AO43633 CCND1-203ENST00000536559 553 ntTSL 3 BASIC18.78■□□□□ 0.6
CHMP2AO43633 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC18.78■□□□□ 0.6
CHMP2AO43633 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC18.78■□□□□ 0.6
CHMP2AO43633 AP001160.2-201ENST00000596071 487 ntBASIC18.78■□□□□ 0.6
CHMP2AO43633 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
CHMP2AO43633 SIGLEC29P-201ENST00000599873 1114 ntBASIC18.78■□□□□ 0.6
CHMP2AO43633 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CHMP2AO43633 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC18.78■□□□□ 0.6
CHMP2AO43633 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC18.78■□□□□ 0.6
CHMP2AO43633 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHMP2AO43633 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHMP2AO43633 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CHMP2AO43633 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC18.78■□□□□ 0.6
CHMP2AO43633 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CHMP2AO43633 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHMP2AO43633 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHMP2AO43633 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHMP2AO43633 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHMP2AO43633 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHMP2AO43633 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
CHMP2AO43633 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC18.78■□□□□ 0.6
CHMP2AO43633 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC18.78■□□□□ 0.6
CHMP2AO43633 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHMP2AO43633 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHMP2AO43633 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC18.78■□□□□ 0.6
CHMP2AO43633 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CHMP2AO43633 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHMP2AO43633 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CHMP2AO43633 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC18.77■□□□□ 0.6
CHMP2AO43633 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC18.77■□□□□ 0.6
CHMP2AO43633 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHMP2AO43633 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHMP2AO43633 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC18.77■□□□□ 0.6
CHMP2AO43633 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHMP2AO43633 PCDHA12-202ENST00000613593 2588 ntBASIC18.77■□□□□ 0.6
CHMP2AO43633 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC18.77■□□□□ 0.6
CHMP2AO43633 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC18.77■□□□□ 0.6
CHMP2AO43633 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CHMP2AO43633 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC18.77■□□□□ 0.6
CHMP2AO43633 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC18.77■□□□□ 0.6
CHMP2AO43633 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
CHMP2AO43633 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
CHMP2AO43633 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
CHMP2AO43633 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC18.77■□□□□ 0.6
CHMP2AO43633 RARRES2P8-201ENST00000566335 367 ntBASIC18.77■□□□□ 0.6
CHMP2AO43633 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC18.77■□□□□ 0.6
CHMP2AO43633 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC18.77■□□□□ 0.6
CHMP2AO43633 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC18.77■□□□□ 0.6
CHMP2AO43633 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC18.77■□□□□ 0.6
CHMP2AO43633 AC079781.4-201ENST00000641908 219 ntBASIC18.77■□□□□ 0.6
CHMP2AO43633 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
CHMP2AO43633 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHMP2AO43633 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHMP2AO43633 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHMP2AO43633 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CHMP2AO43633 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
CHMP2AO43633 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CHMP2AO43633 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CHMP2AO43633 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC18.76■□□□□ 0.59
CHMP2AO43633 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHMP2AO43633 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC18.76■□□□□ 0.59
CHMP2AO43633 AC016027.1-202ENST00000607927 1699 ntBASIC18.76■□□□□ 0.59
CHMP2AO43633 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CHMP2AO43633 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
CHMP2AO43633 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC18.76■□□□□ 0.59
CHMP2AO43633 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHMP2AO43633 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHMP2AO43633 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.76■□□□□ 0.59
CHMP2AO43633 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHMP2AO43633 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHMP2AO43633 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CHMP2AO43633 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC18.76■□□□□ 0.59
CHMP2AO43633 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHMP2AO43633 PMS2P4-201ENST00000412466 1052 ntBASIC18.76■□□□□ 0.59
CHMP2AO43633 AC092474.2-201ENST00000424288 719 ntBASIC18.76■□□□□ 0.59
CHMP2AO43633 CNN2P11-201ENST00000429351 262 ntBASIC18.76■□□□□ 0.59
CHMP2AO43633 WDR53-204ENST00000433160 887 ntTSL 5 BASIC18.76■□□□□ 0.59
CHMP2AO43633 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CHMP2AO43633 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CHMP2AO43633 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC18.76■□□□□ 0.59
CHMP2AO43633 KRT8P48-201ENST00000515599 1220 ntBASIC18.76■□□□□ 0.59
CHMP2AO43633 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC18.76■□□□□ 0.59
CHMP2AO43633 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CHMP2AO43633 AL135744.1-201ENST00000565098 629 ntBASIC18.76■□□□□ 0.59
CHMP2AO43633 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHMP2AO43633 AL161645.1-201ENST00000622716 1255 ntBASIC18.76■□□□□ 0.59
CHMP2AO43633 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC18.76■□□□□ 0.59
CHMP2AO43633 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHMP2AO43633 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
CHMP2AO43633 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms