Protein–RNA interactions for Protein: O15534

PER1, Period circadian protein homolog 1, humanhuman

Predicted RBP Predictions only

Length 1,290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER1O15534 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC22.51■■□□□ 1.19
PER1O15534 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
PER1O15534 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
PER1O15534 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC22.51■■□□□ 1.19
PER1O15534 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC22.51■■□□□ 1.19
PER1O15534 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
PER1O15534 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
PER1O15534 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC22.5■■□□□ 1.19
PER1O15534 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PER1O15534 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
PER1O15534 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
PER1O15534 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
PER1O15534 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PER1O15534 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC22.5■■□□□ 1.19
PER1O15534 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC22.5■■□□□ 1.19
PER1O15534 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC22.5■■□□□ 1.19
PER1O15534 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC22.5■■□□□ 1.19
PER1O15534 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
PER1O15534 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC22.5■■□□□ 1.19
PER1O15534 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
PER1O15534 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC22.5■■□□□ 1.19
PER1O15534 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC22.5■■□□□ 1.19
PER1O15534 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC22.5■■□□□ 1.19
PER1O15534 CCND1-203ENST00000536559 553 ntTSL 3 BASIC22.5■■□□□ 1.19
PER1O15534 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC22.5■■□□□ 1.19
PER1O15534 GPALPP1-207ENST00000611650 899 ntBASIC22.5■■□□□ 1.19
PER1O15534 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC22.5■■□□□ 1.19
PER1O15534 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PER1O15534 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
PER1O15534 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC22.5■■□□□ 1.19
PER1O15534 AC092364.2-201ENST00000596710 2692 ntBASIC22.5■■□□□ 1.19
PER1O15534 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
PER1O15534 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC22.5■■□□□ 1.19
PER1O15534 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
PER1O15534 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
PER1O15534 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC22.5■■□□□ 1.19
PER1O15534 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC22.49■■□□□ 1.19
PER1O15534 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PER1O15534 PCDHB19P-201ENST00000570871 2371 ntBASIC22.49■■□□□ 1.19
PER1O15534 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC22.49■■□□□ 1.19
PER1O15534 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
PER1O15534 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC22.49■■□□□ 1.19
PER1O15534 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PER1O15534 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
PER1O15534 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC22.49■■□□□ 1.19
PER1O15534 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC22.49■■□□□ 1.19
PER1O15534 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
PER1O15534 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PER1O15534 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PER1O15534 AL589702.1-201ENST00000641229 1509 ntBASIC22.49■■□□□ 1.19
PER1O15534 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
PER1O15534 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC22.49■■□□□ 1.19
PER1O15534 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC22.49■■□□□ 1.19
PER1O15534 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
PER1O15534 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC22.49■■□□□ 1.19
PER1O15534 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC22.49■■□□□ 1.19
PER1O15534 AC105233.2-201ENST00000523697 349 ntBASIC22.49■■□□□ 1.19
PER1O15534 AF228730.5-201ENST00000530288 346 ntBASIC22.49■■□□□ 1.19
PER1O15534 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
PER1O15534 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC22.49■■□□□ 1.19
PER1O15534 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC22.49■■□□□ 1.19
PER1O15534 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC22.49■■□□□ 1.19
PER1O15534 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC22.49■■□□□ 1.19
PER1O15534 AL662844.4-201ENST00000606367 2838 ntBASIC22.49■■□□□ 1.19
PER1O15534 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PER1O15534 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PER1O15534 AC006449.5-201ENST00000610658 2098 ntBASIC22.49■■□□□ 1.19
PER1O15534 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
PER1O15534 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
PER1O15534 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PER1O15534 GOLGA6L17P-202ENST00000614358 1398 ntBASIC22.49■■□□□ 1.19
PER1O15534 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC22.49■■□□□ 1.19
PER1O15534 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC22.49■■□□□ 1.19
PER1O15534 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PER1O15534 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
PER1O15534 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
PER1O15534 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC22.48■■□□□ 1.19
PER1O15534 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC22.48■■□□□ 1.19
PER1O15534 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PER1O15534 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC22.48■■□□□ 1.19
PER1O15534 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
PER1O15534 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC22.48■■□□□ 1.19
PER1O15534 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC22.48■■□□□ 1.19
PER1O15534 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC22.48■■□□□ 1.19
PER1O15534 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
PER1O15534 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC22.48■■□□□ 1.19
PER1O15534 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
PER1O15534 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PER1O15534 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
PER1O15534 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PER1O15534 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
PER1O15534 POU5F1P6-201ENST00000466990 990 ntBASIC22.48■■□□□ 1.19
PER1O15534 SLC25A39P2-201ENST00000537614 270 ntBASIC22.48■■□□□ 1.19
PER1O15534 QPRT-203ENST00000562473 579 ntTSL 3 BASIC22.48■■□□□ 1.19
PER1O15534 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
PER1O15534 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
PER1O15534 AC004835.2-201ENST00000603762 682 ntBASIC22.48■■□□□ 1.19
PER1O15534 AL596442.2-201ENST00000610240 980 ntBASIC22.48■■□□□ 1.19
PER1O15534 AC009093.7-201ENST00000623853 1223 ntBASIC22.48■■□□□ 1.19
PER1O15534 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms