Protein–RNA interactions for Protein: A0A0A0MS03

TRBV5-3, T-cell receptor beta variable 5-3 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-3A0A0A0MS03 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC15.64■□□□□ 0.09
TRBV5-3A0A0A0MS03 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRBV5-3A0A0A0MS03 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRBV5-3A0A0A0MS03 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRBV5-3A0A0A0MS03 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRBV5-3A0A0A0MS03 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRBV5-3A0A0A0MS03 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRBV5-3A0A0A0MS03 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC15.64■□□□□ 0.09
TRBV5-3A0A0A0MS03 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRBV5-3A0A0A0MS03 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC15.64■□□□□ 0.09
TRBV5-3A0A0A0MS03 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC15.64■□□□□ 0.09
TRBV5-3A0A0A0MS03 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC15.64■□□□□ 0.09
TRBV5-3A0A0A0MS03 AC087641.1-201ENST00000557561 1021 ntBASIC15.64■□□□□ 0.09
TRBV5-3A0A0A0MS03 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC15.64■□□□□ 0.09
TRBV5-3A0A0A0MS03 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC15.64■□□□□ 0.09
TRBV5-3A0A0A0MS03 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC15.64■□□□□ 0.09
TRBV5-3A0A0A0MS03 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
TRBV5-3A0A0A0MS03 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC15.64■□□□□ 0.09
TRBV5-3A0A0A0MS03 AC091076.1-201ENST00000610741 619 ntBASIC15.64■□□□□ 0.09
TRBV5-3A0A0A0MS03 BSG-214ENST00000614867 960 ntTSL 3 BASIC15.64■□□□□ 0.09
TRBV5-3A0A0A0MS03 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC15.64■□□□□ 0.09
TRBV5-3A0A0A0MS03 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRBV5-3A0A0A0MS03 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRBV5-3A0A0A0MS03 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRBV5-3A0A0A0MS03 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRBV5-3A0A0A0MS03 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRBV5-3A0A0A0MS03 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRBV5-3A0A0A0MS03 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRBV5-3A0A0A0MS03 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
TRBV5-3A0A0A0MS03 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC15.64■□□□□ 0.09
TRBV5-3A0A0A0MS03 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRBV5-3A0A0A0MS03 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRBV5-3A0A0A0MS03 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC15.64■□□□□ 0.09
TRBV5-3A0A0A0MS03 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
TRBV5-3A0A0A0MS03 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRBV5-3A0A0A0MS03 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRBV5-3A0A0A0MS03 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRBV5-3A0A0A0MS03 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC15.63■□□□□ 0.09
TRBV5-3A0A0A0MS03 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC15.63■□□□□ 0.09
TRBV5-3A0A0A0MS03 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRBV5-3A0A0A0MS03 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRBV5-3A0A0A0MS03 ACE-203ENST00000413513 2237 ntTSL 2 BASIC15.63■□□□□ 0.09
TRBV5-3A0A0A0MS03 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRBV5-3A0A0A0MS03 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC15.63■□□□□ 0.09
TRBV5-3A0A0A0MS03 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRBV5-3A0A0A0MS03 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC15.63■□□□□ 0.09
TRBV5-3A0A0A0MS03 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
TRBV5-3A0A0A0MS03 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRBV5-3A0A0A0MS03 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC15.63■□□□□ 0.09
TRBV5-3A0A0A0MS03 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC15.63■□□□□ 0.09
TRBV5-3A0A0A0MS03 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC15.63■□□□□ 0.09
TRBV5-3A0A0A0MS03 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRBV5-3A0A0A0MS03 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC15.63■□□□□ 0.09
TRBV5-3A0A0A0MS03 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC15.63■□□□□ 0.09
TRBV5-3A0A0A0MS03 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
TRBV5-3A0A0A0MS03 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC15.63■□□□□ 0.09
TRBV5-3A0A0A0MS03 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRBV5-3A0A0A0MS03 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC15.63■□□□□ 0.09
TRBV5-3A0A0A0MS03 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC15.63■□□□□ 0.09
TRBV5-3A0A0A0MS03 AC005412.3-201ENST00000580309 715 ntBASIC15.63■□□□□ 0.09
TRBV5-3A0A0A0MS03 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRBV5-3A0A0A0MS03 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC15.63■□□□□ 0.09
TRBV5-3A0A0A0MS03 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC15.63■□□□□ 0.09
TRBV5-3A0A0A0MS03 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC15.63■□□□□ 0.09
TRBV5-3A0A0A0MS03 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRBV5-3A0A0A0MS03 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC15.63■□□□□ 0.09
TRBV5-3A0A0A0MS03 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRBV5-3A0A0A0MS03 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRBV5-3A0A0A0MS03 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC15.63■□□□□ 0.09
TRBV5-3A0A0A0MS03 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC15.63■□□□□ 0.09
TRBV5-3A0A0A0MS03 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRBV5-3A0A0A0MS03 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRBV5-3A0A0A0MS03 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRBV5-3A0A0A0MS03 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
TRBV5-3A0A0A0MS03 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
TRBV5-3A0A0A0MS03 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRBV5-3A0A0A0MS03 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC15.62■□□□□ 0.09
TRBV5-3A0A0A0MS03 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRBV5-3A0A0A0MS03 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC15.62■□□□□ 0.09
TRBV5-3A0A0A0MS03 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRBV5-3A0A0A0MS03 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC15.62■□□□□ 0.09
TRBV5-3A0A0A0MS03 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC15.62■□□□□ 0.09
TRBV5-3A0A0A0MS03 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRBV5-3A0A0A0MS03 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
TRBV5-3A0A0A0MS03 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRBV5-3A0A0A0MS03 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRBV5-3A0A0A0MS03 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC15.62■□□□□ 0.09
TRBV5-3A0A0A0MS03 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRBV5-3A0A0A0MS03 HCG4-201ENST00000418983 998 ntBASIC15.62■□□□□ 0.09
TRBV5-3A0A0A0MS03 MSRA-206ENST00000521209 814 ntTSL 3 BASIC15.62■□□□□ 0.09
TRBV5-3A0A0A0MS03 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC15.62■□□□□ 0.09
TRBV5-3A0A0A0MS03 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC15.62■□□□□ 0.09
TRBV5-3A0A0A0MS03 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC15.62■□□□□ 0.09
TRBV5-3A0A0A0MS03 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC15.62■□□□□ 0.09
TRBV5-3A0A0A0MS03 PAM16-208ENST00000573553 722 ntTSL 2 BASIC15.62■□□□□ 0.09
TRBV5-3A0A0A0MS03 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC15.62■□□□□ 0.09
TRBV5-3A0A0A0MS03 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC15.62■□□□□ 0.09
TRBV5-3A0A0A0MS03 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC15.62■□□□□ 0.09
TRBV5-3A0A0A0MS03 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRBV5-3A0A0A0MS03 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms