Protein–RNA interactions for Protein: Q9Y446

PKP3, Plakophilin-3, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3Q9Y446 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PKP3Q9Y446 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
PKP3Q9Y446 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PKP3Q9Y446 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PKP3Q9Y446 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PKP3Q9Y446 PMS2P1-201ENST00000431037 1228 ntBASIC16.83■□□□□ 0.28
PKP3Q9Y446 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC16.83■□□□□ 0.28
PKP3Q9Y446 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PKP3Q9Y446 PC-204ENST00000524491 1714 ntTSL 2 BASIC16.83■□□□□ 0.28
PKP3Q9Y446 SLC25A1P1-201ENST00000528351 927 ntBASIC16.83■□□□□ 0.28
PKP3Q9Y446 SLC22A20-204ENST00000530038 1673 ntBASIC16.83■□□□□ 0.28
PKP3Q9Y446 POLD4-207ENST00000531239 584 ntTSL 2 BASIC16.83■□□□□ 0.28
PKP3Q9Y446 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC16.83■□□□□ 0.28
PKP3Q9Y446 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PKP3Q9Y446 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC16.83■□□□□ 0.28
PKP3Q9Y446 AC106730.1-201ENST00000566722 1090 ntBASIC16.83■□□□□ 0.28
PKP3Q9Y446 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC16.83■□□□□ 0.28
PKP3Q9Y446 AC064836.3-201ENST00000607928 673 ntBASIC16.83■□□□□ 0.28
PKP3Q9Y446 ACTL9-202ENST00000612068 1252 ntBASIC16.83■□□□□ 0.28
PKP3Q9Y446 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC16.83■□□□□ 0.28
PKP3Q9Y446 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
PKP3Q9Y446 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.28
PKP3Q9Y446 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
PKP3Q9Y446 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PKP3Q9Y446 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PKP3Q9Y446 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC16.82■□□□□ 0.28
PKP3Q9Y446 AL603756.1-201ENST00000606511 2163 ntBASIC16.82■□□□□ 0.28
PKP3Q9Y446 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PKP3Q9Y446 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PKP3Q9Y446 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PKP3Q9Y446 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.82■□□□□ 0.28
PKP3Q9Y446 AC012569.1-201ENST00000591191 1524 ntBASIC16.82■□□□□ 0.28
PKP3Q9Y446 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PKP3Q9Y446 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.82■□□□□ 0.28
PKP3Q9Y446 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
PKP3Q9Y446 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC16.82■□□□□ 0.28
PKP3Q9Y446 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
PKP3Q9Y446 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC16.82■□□□□ 0.28
PKP3Q9Y446 IGLL3P-201ENST00000412472 434 ntBASIC16.82■□□□□ 0.28
PKP3Q9Y446 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC16.82■□□□□ 0.28
PKP3Q9Y446 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PKP3Q9Y446 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC16.82■□□□□ 0.28
PKP3Q9Y446 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
PKP3Q9Y446 HS6ST1P1-201ENST00000481504 1234 ntBASIC16.82■□□□□ 0.28
PKP3Q9Y446 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PKP3Q9Y446 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC16.82■□□□□ 0.28
PKP3Q9Y446 MMP17-203ENST00000535004 719 ntTSL 3 BASIC16.82■□□□□ 0.28
PKP3Q9Y446 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC16.82■□□□□ 0.28
PKP3Q9Y446 AC096734.2-201ENST00000562054 433 ntBASIC16.82■□□□□ 0.28
PKP3Q9Y446 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC16.82■□□□□ 0.28
PKP3Q9Y446 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
PKP3Q9Y446 MIR4492-201ENST00000581627 80 ntBASIC16.82■□□□□ 0.28
PKP3Q9Y446 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC16.82■□□□□ 0.28
PKP3Q9Y446 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC16.82■□□□□ 0.28
PKP3Q9Y446 AL139011.1-202ENST00000642063 584 ntBASIC16.82■□□□□ 0.28
PKP3Q9Y446 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PKP3Q9Y446 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC16.82■□□□□ 0.28
PKP3Q9Y446 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PKP3Q9Y446 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
PKP3Q9Y446 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
PKP3Q9Y446 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PKP3Q9Y446 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
PKP3Q9Y446 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PKP3Q9Y446 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC16.82■□□□□ 0.28
PKP3Q9Y446 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PKP3Q9Y446 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PKP3Q9Y446 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC16.82■□□□□ 0.28
PKP3Q9Y446 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
PKP3Q9Y446 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PKP3Q9Y446 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
PKP3Q9Y446 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
PKP3Q9Y446 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PKP3Q9Y446 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.81■□□□□ 0.28
PKP3Q9Y446 AGGF1P2-201ENST00000426656 2106 ntBASIC16.81■□□□□ 0.28
PKP3Q9Y446 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PKP3Q9Y446 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PKP3Q9Y446 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PKP3Q9Y446 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
PKP3Q9Y446 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PKP3Q9Y446 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PKP3Q9Y446 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PKP3Q9Y446 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PKP3Q9Y446 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PKP3Q9Y446 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC16.81■□□□□ 0.28
PKP3Q9Y446 LBH-204ENST00000406087 559 ntTSL 4 BASIC16.81■□□□□ 0.28
PKP3Q9Y446 CDK2AP2P3-201ENST00000422476 372 ntBASIC16.81■□□□□ 0.28
PKP3Q9Y446 AC007967.2-201ENST00000432613 625 ntBASIC16.81■□□□□ 0.28
PKP3Q9Y446 AL591424.1-201ENST00000442569 1213 ntBASIC16.81■□□□□ 0.28
PKP3Q9Y446 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
PKP3Q9Y446 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC16.81■□□□□ 0.28
PKP3Q9Y446 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC16.81■□□□□ 0.28
PKP3Q9Y446 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC16.81■□□□□ 0.28
PKP3Q9Y446 CYP2A7P1-201ENST00000595391 815 ntBASIC16.81■□□□□ 0.28
PKP3Q9Y446 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC16.81■□□□□ 0.28
PKP3Q9Y446 WT1-AS_2.1-201ENST00000613208 137 ntBASIC16.81■□□□□ 0.28
PKP3Q9Y446 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PKP3Q9Y446 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC16.81■□□□□ 0.28
PKP3Q9Y446 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
PKP3Q9Y446 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PKP3Q9Y446 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms