Protein–RNA interactions for Protein: Q9Y2U8

LEMD3, Inner nuclear membrane protein Man1, humanhuman

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3Q9Y2U8 AC020765.3-201ENST00000613051 740 ntBASIC20.15■□□□□ 0.82
LEMD3Q9Y2U8 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC20.15■□□□□ 0.82
LEMD3Q9Y2U8 AL358472.5-202ENST00000641448 1267 ntBASIC20.15■□□□□ 0.82
LEMD3Q9Y2U8 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
LEMD3Q9Y2U8 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC20.15■□□□□ 0.82
LEMD3Q9Y2U8 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
LEMD3Q9Y2U8 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
LEMD3Q9Y2U8 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LEMD3Q9Y2U8 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LEMD3Q9Y2U8 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
LEMD3Q9Y2U8 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LEMD3Q9Y2U8 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
LEMD3Q9Y2U8 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LEMD3Q9Y2U8 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
LEMD3Q9Y2U8 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.82
LEMD3Q9Y2U8 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.82
LEMD3Q9Y2U8 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
LEMD3Q9Y2U8 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
LEMD3Q9Y2U8 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
LEMD3Q9Y2U8 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LEMD3Q9Y2U8 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LEMD3Q9Y2U8 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
LEMD3Q9Y2U8 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
LEMD3Q9Y2U8 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC20.14■□□□□ 0.81
LEMD3Q9Y2U8 AL023806.1-201ENST00000603994 1649 ntBASIC20.14■□□□□ 0.81
LEMD3Q9Y2U8 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC20.14■□□□□ 0.81
LEMD3Q9Y2U8 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC20.14■□□□□ 0.81
LEMD3Q9Y2U8 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC20.14■□□□□ 0.81
LEMD3Q9Y2U8 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
LEMD3Q9Y2U8 CALY-202ENST00000368555 783 ntTSL 2 BASIC20.14■□□□□ 0.81
LEMD3Q9Y2U8 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
LEMD3Q9Y2U8 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC20.14■□□□□ 0.81
LEMD3Q9Y2U8 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
LEMD3Q9Y2U8 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC20.14■□□□□ 0.81
LEMD3Q9Y2U8 COQ9-214ENST00000567933 882 ntTSL 3 BASIC20.14■□□□□ 0.81
LEMD3Q9Y2U8 PRR29-204ENST00000577953 565 ntTSL 4 BASIC20.14■□□□□ 0.81
LEMD3Q9Y2U8 AC004233.3-201ENST00000607794 1269 ntBASIC20.14■□□□□ 0.81
LEMD3Q9Y2U8 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LEMD3Q9Y2U8 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
LEMD3Q9Y2U8 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LEMD3Q9Y2U8 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC20.14■□□□□ 0.81
LEMD3Q9Y2U8 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC20.13■□□□□ 0.81
LEMD3Q9Y2U8 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LEMD3Q9Y2U8 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LEMD3Q9Y2U8 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC20.13■□□□□ 0.81
LEMD3Q9Y2U8 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC20.13■□□□□ 0.81
LEMD3Q9Y2U8 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
LEMD3Q9Y2U8 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC20.13■□□□□ 0.81
LEMD3Q9Y2U8 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LEMD3Q9Y2U8 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LEMD3Q9Y2U8 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
LEMD3Q9Y2U8 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LEMD3Q9Y2U8 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
LEMD3Q9Y2U8 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LEMD3Q9Y2U8 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC20.13■□□□□ 0.81
LEMD3Q9Y2U8 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
LEMD3Q9Y2U8 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LEMD3Q9Y2U8 AL645728.1-201ENST00000366221 2101 ntBASIC20.13■□□□□ 0.81
LEMD3Q9Y2U8 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
LEMD3Q9Y2U8 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LEMD3Q9Y2U8 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC20.13■□□□□ 0.81
LEMD3Q9Y2U8 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC20.13■□□□□ 0.81
LEMD3Q9Y2U8 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LEMD3Q9Y2U8 AL079307.3-201ENST00000556114 283 ntBASIC20.13■□□□□ 0.81
LEMD3Q9Y2U8 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
LEMD3Q9Y2U8 AC025048.6-201ENST00000634326 1161 ntBASIC20.13■□□□□ 0.81
LEMD3Q9Y2U8 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC20.13■□□□□ 0.81
LEMD3Q9Y2U8 AC141586.5-201ENST00000624546 2050 ntBASIC20.13■□□□□ 0.81
LEMD3Q9Y2U8 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
LEMD3Q9Y2U8 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LEMD3Q9Y2U8 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
LEMD3Q9Y2U8 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
LEMD3Q9Y2U8 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
LEMD3Q9Y2U8 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
LEMD3Q9Y2U8 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC20.13■□□□□ 0.81
LEMD3Q9Y2U8 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LEMD3Q9Y2U8 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LEMD3Q9Y2U8 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC20.13■□□□□ 0.81
LEMD3Q9Y2U8 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
LEMD3Q9Y2U8 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC20.13■□□□□ 0.81
LEMD3Q9Y2U8 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC20.13■□□□□ 0.81
LEMD3Q9Y2U8 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LEMD3Q9Y2U8 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
LEMD3Q9Y2U8 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC20.12■□□□□ 0.81
LEMD3Q9Y2U8 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
LEMD3Q9Y2U8 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
LEMD3Q9Y2U8 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LEMD3Q9Y2U8 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LEMD3Q9Y2U8 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC20.12■□□□□ 0.81
LEMD3Q9Y2U8 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
LEMD3Q9Y2U8 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LEMD3Q9Y2U8 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC20.12■□□□□ 0.81
LEMD3Q9Y2U8 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LEMD3Q9Y2U8 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC20.12■□□□□ 0.81
LEMD3Q9Y2U8 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC20.12■□□□□ 0.81
LEMD3Q9Y2U8 GRAP-202ENST00000395635 834 ntTSL 2 BASIC20.12■□□□□ 0.81
LEMD3Q9Y2U8 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
LEMD3Q9Y2U8 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC20.12■□□□□ 0.81
LEMD3Q9Y2U8 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC20.12■□□□□ 0.81
LEMD3Q9Y2U8 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms