Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC15.4■□□□□ 0.06
RPH3AQ9Y2J0 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC15.4■□□□□ 0.06
RPH3AQ9Y2J0 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC15.4■□□□□ 0.06
RPH3AQ9Y2J0 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC15.4■□□□□ 0.06
RPH3AQ9Y2J0 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC15.4■□□□□ 0.06
RPH3AQ9Y2J0 AC010507.1-201ENST00000633895 436 ntBASIC15.4■□□□□ 0.06
RPH3AQ9Y2J0 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RPH3AQ9Y2J0 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
RPH3AQ9Y2J0 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RPH3AQ9Y2J0 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
RPH3AQ9Y2J0 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
RPH3AQ9Y2J0 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
RPH3AQ9Y2J0 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC15.4■□□□□ 0.06
RPH3AQ9Y2J0 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RPH3AQ9Y2J0 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
RPH3AQ9Y2J0 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RPH3AQ9Y2J0 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RPH3AQ9Y2J0 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC15.4■□□□□ 0.06
RPH3AQ9Y2J0 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC15.4■□□□□ 0.06
RPH3AQ9Y2J0 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RPH3AQ9Y2J0 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RPH3AQ9Y2J0 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC15.4■□□□□ 0.06
RPH3AQ9Y2J0 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
RPH3AQ9Y2J0 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC15.4■□□□□ 0.06
RPH3AQ9Y2J0 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
RPH3AQ9Y2J0 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RPH3AQ9Y2J0 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RPH3AQ9Y2J0 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC15.4■□□□□ 0.06
RPH3AQ9Y2J0 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RPH3AQ9Y2J0 AC060834.1-201ENST00000443027 2032 ntBASIC15.39■□□□□ 0.05
RPH3AQ9Y2J0 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RPH3AQ9Y2J0 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RPH3AQ9Y2J0 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RPH3AQ9Y2J0 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RPH3AQ9Y2J0 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC15.39■□□□□ 0.05
RPH3AQ9Y2J0 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RPH3AQ9Y2J0 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RPH3AQ9Y2J0 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RPH3AQ9Y2J0 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
RPH3AQ9Y2J0 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RPH3AQ9Y2J0 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC15.39■□□□□ 0.05
RPH3AQ9Y2J0 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RPH3AQ9Y2J0 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
RPH3AQ9Y2J0 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
RPH3AQ9Y2J0 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RPH3AQ9Y2J0 IMP4-203ENST00000409935 958 ntTSL 5 BASIC15.39■□□□□ 0.05
RPH3AQ9Y2J0 FIS1-203ENST00000442303 631 ntTSL 3 BASIC15.39■□□□□ 0.05
RPH3AQ9Y2J0 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC15.39■□□□□ 0.05
RPH3AQ9Y2J0 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC15.39■□□□□ 0.05
RPH3AQ9Y2J0 AC004967.1-201ENST00000453589 447 ntBASIC15.39■□□□□ 0.05
RPH3AQ9Y2J0 AC112482.1-201ENST00000492080 688 ntBASIC15.39■□□□□ 0.05
RPH3AQ9Y2J0 DHDH-204ENST00000523250 634 ntTSL 5 BASIC15.39■□□□□ 0.05
RPH3AQ9Y2J0 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC15.39■□□□□ 0.05
RPH3AQ9Y2J0 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC15.39■□□□□ 0.05
RPH3AQ9Y2J0 RPS15-207ENST00000591032 550 ntTSL 3 BASIC15.39■□□□□ 0.05
RPH3AQ9Y2J0 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC15.39■□□□□ 0.05
RPH3AQ9Y2J0 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RPH3AQ9Y2J0 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
RPH3AQ9Y2J0 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RPH3AQ9Y2J0 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
RPH3AQ9Y2J0 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
RPH3AQ9Y2J0 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RPH3AQ9Y2J0 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
RPH3AQ9Y2J0 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RPH3AQ9Y2J0 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RPH3AQ9Y2J0 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RPH3AQ9Y2J0 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
RPH3AQ9Y2J0 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC15.39■□□□□ 0.05
RPH3AQ9Y2J0 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC15.39■□□□□ 0.05
RPH3AQ9Y2J0 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RPH3AQ9Y2J0 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RPH3AQ9Y2J0 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RPH3AQ9Y2J0 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC15.39■□□□□ 0.05
RPH3AQ9Y2J0 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
RPH3AQ9Y2J0 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RPH3AQ9Y2J0 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC15.38■□□□□ 0.05
RPH3AQ9Y2J0 AD000864.1-201ENST00000624076 2295 ntBASIC15.38■□□□□ 0.05
RPH3AQ9Y2J0 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
RPH3AQ9Y2J0 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RPH3AQ9Y2J0 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC15.38■□□□□ 0.05
RPH3AQ9Y2J0 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC15.38■□□□□ 0.05
RPH3AQ9Y2J0 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RPH3AQ9Y2J0 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
RPH3AQ9Y2J0 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RPH3AQ9Y2J0 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC15.38■□□□□ 0.05
RPH3AQ9Y2J0 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RPH3AQ9Y2J0 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
RPH3AQ9Y2J0 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC15.38■□□□□ 0.05
RPH3AQ9Y2J0 AL513480.1-201ENST00000451731 511 ntBASIC15.38■□□□□ 0.05
RPH3AQ9Y2J0 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC15.38■□□□□ 0.05
RPH3AQ9Y2J0 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC15.38■□□□□ 0.05
RPH3AQ9Y2J0 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC15.38■□□□□ 0.05
RPH3AQ9Y2J0 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC15.38■□□□□ 0.05
RPH3AQ9Y2J0 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC15.38■□□□□ 0.05
RPH3AQ9Y2J0 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
RPH3AQ9Y2J0 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
RPH3AQ9Y2J0 AC004877.2-201ENST00000623941 599 ntBASIC15.38■□□□□ 0.05
RPH3AQ9Y2J0 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC15.38■□□□□ 0.05
RPH3AQ9Y2J0 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC15.38■□□□□ 0.05
RPH3AQ9Y2J0 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms