Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SSX2IPQ9Y2D8 Z92544.3-201ENST00000624747 417 ntBASIC18■□□□□ 0.47
SSX2IPQ9Y2D8 AP001350.2-201ENST00000625104 1094 ntBASIC18■□□□□ 0.47
SSX2IPQ9Y2D8 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC18■□□□□ 0.47
SSX2IPQ9Y2D8 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC18■□□□□ 0.47
SSX2IPQ9Y2D8 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC18■□□□□ 0.47
SSX2IPQ9Y2D8 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
SSX2IPQ9Y2D8 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC18■□□□□ 0.47
SSX2IPQ9Y2D8 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC18■□□□□ 0.47
SSX2IPQ9Y2D8 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SSX2IPQ9Y2D8 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SSX2IPQ9Y2D8 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC18■□□□□ 0.47
SSX2IPQ9Y2D8 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC18■□□□□ 0.47
SSX2IPQ9Y2D8 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SSX2IPQ9Y2D8 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC18■□□□□ 0.47
SSX2IPQ9Y2D8 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC18■□□□□ 0.47
SSX2IPQ9Y2D8 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
SSX2IPQ9Y2D8 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SSX2IPQ9Y2D8 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
SSX2IPQ9Y2D8 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
SSX2IPQ9Y2D8 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SSX2IPQ9Y2D8 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
SSX2IPQ9Y2D8 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SSX2IPQ9Y2D8 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC17.99■□□□□ 0.47
SSX2IPQ9Y2D8 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
SSX2IPQ9Y2D8 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SSX2IPQ9Y2D8 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SSX2IPQ9Y2D8 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SSX2IPQ9Y2D8 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
SSX2IPQ9Y2D8 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SSX2IPQ9Y2D8 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
SSX2IPQ9Y2D8 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SSX2IPQ9Y2D8 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC17.99■□□□□ 0.47
SSX2IPQ9Y2D8 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC17.99■□□□□ 0.47
SSX2IPQ9Y2D8 AC069262.1-201ENST00000539058 672 ntBASIC17.99■□□□□ 0.47
SSX2IPQ9Y2D8 GREM1-201ENST00000560677 623 ntTSL 4 BASIC17.99■□□□□ 0.47
SSX2IPQ9Y2D8 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC17.99■□□□□ 0.47
SSX2IPQ9Y2D8 INO80E-210ENST00000567705 880 ntTSL 3 BASIC17.99■□□□□ 0.47
SSX2IPQ9Y2D8 AC091167.2-201ENST00000579581 588 ntBASIC17.99■□□□□ 0.47
SSX2IPQ9Y2D8 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
SSX2IPQ9Y2D8 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
SSX2IPQ9Y2D8 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SSX2IPQ9Y2D8 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC17.99■□□□□ 0.47
SSX2IPQ9Y2D8 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
SSX2IPQ9Y2D8 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SSX2IPQ9Y2D8 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC17.99■□□□□ 0.47
SSX2IPQ9Y2D8 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SSX2IPQ9Y2D8 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SSX2IPQ9Y2D8 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC17.99■□□□□ 0.47
SSX2IPQ9Y2D8 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.99■□□□□ 0.47
SSX2IPQ9Y2D8 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
SSX2IPQ9Y2D8 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SSX2IPQ9Y2D8 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SSX2IPQ9Y2D8 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC17.99■□□□□ 0.47
SSX2IPQ9Y2D8 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
SSX2IPQ9Y2D8 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.98■□□□□ 0.47
SSX2IPQ9Y2D8 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
SSX2IPQ9Y2D8 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
SSX2IPQ9Y2D8 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SSX2IPQ9Y2D8 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.98■□□□□ 0.47
SSX2IPQ9Y2D8 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
SSX2IPQ9Y2D8 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
SSX2IPQ9Y2D8 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.98■□□□□ 0.47
SSX2IPQ9Y2D8 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
SSX2IPQ9Y2D8 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
SSX2IPQ9Y2D8 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SSX2IPQ9Y2D8 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
SSX2IPQ9Y2D8 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SSX2IPQ9Y2D8 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
SSX2IPQ9Y2D8 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC17.98■□□□□ 0.47
SSX2IPQ9Y2D8 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC17.98■□□□□ 0.47
SSX2IPQ9Y2D8 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC17.98■□□□□ 0.47
SSX2IPQ9Y2D8 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC17.98■□□□□ 0.47
SSX2IPQ9Y2D8 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SSX2IPQ9Y2D8 MTRF1LP2-201ENST00000506027 1122 ntBASIC17.98■□□□□ 0.47
SSX2IPQ9Y2D8 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SSX2IPQ9Y2D8 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SSX2IPQ9Y2D8 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC17.98■□□□□ 0.47
SSX2IPQ9Y2D8 MIR3909-201ENST00000579518 119 ntBASIC17.98■□□□□ 0.47
SSX2IPQ9Y2D8 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SSX2IPQ9Y2D8 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC17.98■□□□□ 0.47
SSX2IPQ9Y2D8 AC005498.2-205ENST00000593218 784 ntBASIC17.98■□□□□ 0.47
SSX2IPQ9Y2D8 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
SSX2IPQ9Y2D8 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
SSX2IPQ9Y2D8 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
SSX2IPQ9Y2D8 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
SSX2IPQ9Y2D8 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
SSX2IPQ9Y2D8 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
SSX2IPQ9Y2D8 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
SSX2IPQ9Y2D8 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SSX2IPQ9Y2D8 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
SSX2IPQ9Y2D8 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SSX2IPQ9Y2D8 AC016396.2-201ENST00000562575 1417 ntBASIC17.98■□□□□ 0.47
SSX2IPQ9Y2D8 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SSX2IPQ9Y2D8 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SSX2IPQ9Y2D8 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SSX2IPQ9Y2D8 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SSX2IPQ9Y2D8 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SSX2IPQ9Y2D8 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.97■□□□□ 0.47
SSX2IPQ9Y2D8 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms