Protein–RNA interactions for Protein: Q9UMX0

UBQLN1, Ubiquilin-1, humanhuman

Known RBP Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1Q9UMX0 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
UBQLN1Q9UMX0 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
UBQLN1Q9UMX0 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
UBQLN1Q9UMX0 DPM2-202ENST00000373110 738 ntTSL 2 BASIC17.89■□□□□ 0.45
UBQLN1Q9UMX0 PTMS-202ENST00000389462 773 ntTSL 2 BASIC17.89■□□□□ 0.45
UBQLN1Q9UMX0 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
UBQLN1Q9UMX0 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
UBQLN1Q9UMX0 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
UBQLN1Q9UMX0 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC17.89■□□□□ 0.45
UBQLN1Q9UMX0 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC17.89■□□□□ 0.45
UBQLN1Q9UMX0 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
UBQLN1Q9UMX0 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC17.89■□□□□ 0.45
UBQLN1Q9UMX0 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
UBQLN1Q9UMX0 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
UBQLN1Q9UMX0 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
UBQLN1Q9UMX0 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
UBQLN1Q9UMX0 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
UBQLN1Q9UMX0 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
UBQLN1Q9UMX0 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
UBQLN1Q9UMX0 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC17.89■□□□□ 0.45
UBQLN1Q9UMX0 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC17.89■□□□□ 0.45
UBQLN1Q9UMX0 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
UBQLN1Q9UMX0 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
UBQLN1Q9UMX0 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
UBQLN1Q9UMX0 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
UBQLN1Q9UMX0 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
UBQLN1Q9UMX0 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC17.88■□□□□ 0.45
UBQLN1Q9UMX0 AC006538.1-201ENST00000567905 1585 ntBASIC17.88■□□□□ 0.45
UBQLN1Q9UMX0 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
UBQLN1Q9UMX0 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC17.88■□□□□ 0.45
UBQLN1Q9UMX0 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
UBQLN1Q9UMX0 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
UBQLN1Q9UMX0 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC17.88■□□□□ 0.45
UBQLN1Q9UMX0 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
UBQLN1Q9UMX0 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC17.88■□□□□ 0.45
UBQLN1Q9UMX0 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
UBQLN1Q9UMX0 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
UBQLN1Q9UMX0 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC17.88■□□□□ 0.45
UBQLN1Q9UMX0 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
UBQLN1Q9UMX0 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC17.88■□□□□ 0.45
UBQLN1Q9UMX0 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC17.88■□□□□ 0.45
UBQLN1Q9UMX0 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC17.88■□□□□ 0.45
UBQLN1Q9UMX0 AC004449.1-201ENST00000564240 433 ntBASIC17.88■□□□□ 0.45
UBQLN1Q9UMX0 AP000842.3-202ENST00000569238 1080 ntBASIC17.88■□□□□ 0.45
UBQLN1Q9UMX0 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC17.88■□□□□ 0.45
UBQLN1Q9UMX0 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
UBQLN1Q9UMX0 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC17.88■□□□□ 0.45
UBQLN1Q9UMX0 LINC00628-201ENST00000628516 1289 ntBASIC17.88■□□□□ 0.45
UBQLN1Q9UMX0 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
UBQLN1Q9UMX0 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
UBQLN1Q9UMX0 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.88■□□□□ 0.45
UBQLN1Q9UMX0 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
UBQLN1Q9UMX0 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
UBQLN1Q9UMX0 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
UBQLN1Q9UMX0 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC17.88■□□□□ 0.45
UBQLN1Q9UMX0 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
UBQLN1Q9UMX0 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
UBQLN1Q9UMX0 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
UBQLN1Q9UMX0 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
UBQLN1Q9UMX0 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
UBQLN1Q9UMX0 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
UBQLN1Q9UMX0 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
UBQLN1Q9UMX0 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
UBQLN1Q9UMX0 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
UBQLN1Q9UMX0 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
UBQLN1Q9UMX0 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
UBQLN1Q9UMX0 OR6D1P-203ENST00000641209 4860 ntBASIC17.87■□□□□ 0.45
UBQLN1Q9UMX0 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.87■□□□□ 0.45
UBQLN1Q9UMX0 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.87■□□□□ 0.45
UBQLN1Q9UMX0 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC17.87■□□□□ 0.45
UBQLN1Q9UMX0 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC17.87■□□□□ 0.45
UBQLN1Q9UMX0 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
UBQLN1Q9UMX0 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
UBQLN1Q9UMX0 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
UBQLN1Q9UMX0 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
UBQLN1Q9UMX0 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.87■□□□□ 0.45
UBQLN1Q9UMX0 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
UBQLN1Q9UMX0 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
UBQLN1Q9UMX0 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
UBQLN1Q9UMX0 MIR346-201ENST00000362234 95 ntBASIC17.87■□□□□ 0.45
UBQLN1Q9UMX0 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
UBQLN1Q9UMX0 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC17.87■□□□□ 0.45
UBQLN1Q9UMX0 FAM58DP-201ENST00000428076 619 ntBASIC17.87■□□□□ 0.45
UBQLN1Q9UMX0 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC17.87■□□□□ 0.45
UBQLN1Q9UMX0 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
UBQLN1Q9UMX0 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC17.87■□□□□ 0.45
UBQLN1Q9UMX0 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
UBQLN1Q9UMX0 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
UBQLN1Q9UMX0 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
UBQLN1Q9UMX0 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC17.87■□□□□ 0.45
UBQLN1Q9UMX0 AL138918.1-201ENST00000568306 659 ntBASIC17.87■□□□□ 0.45
UBQLN1Q9UMX0 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC17.87■□□□□ 0.45
UBQLN1Q9UMX0 SSH2-211ENST00000590153 570 ntTSL 4 BASIC17.87■□□□□ 0.45
UBQLN1Q9UMX0 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC17.87■□□□□ 0.45
UBQLN1Q9UMX0 NKG7-205ENST00000600427 520 ntTSL 3 BASIC17.87■□□□□ 0.45
UBQLN1Q9UMX0 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
UBQLN1Q9UMX0 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.87■□□□□ 0.45
UBQLN1Q9UMX0 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC17.87■□□□□ 0.45
UBQLN1Q9UMX0 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
UBQLN1Q9UMX0 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms