Protein–RNA interactions for Protein: Q9NWW0

HCFC1R1, Host cell factor C1 regulator 1, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1Q9NWW0 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC17.25■□□□□ 0.35
HCFC1R1Q9NWW0 AC105021.1-202ENST00000570572 669 ntBASIC17.25■□□□□ 0.35
HCFC1R1Q9NWW0 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
HCFC1R1Q9NWW0 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC17.25■□□□□ 0.35
HCFC1R1Q9NWW0 SRP9-204ENST00000619790 377 ntTSL 2 BASIC17.25■□□□□ 0.35
HCFC1R1Q9NWW0 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC17.25■□□□□ 0.35
HCFC1R1Q9NWW0 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HCFC1R1Q9NWW0 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HCFC1R1Q9NWW0 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HCFC1R1Q9NWW0 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.25■□□□□ 0.35
HCFC1R1Q9NWW0 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HCFC1R1Q9NWW0 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
HCFC1R1Q9NWW0 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HCFC1R1Q9NWW0 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC17.25■□□□□ 0.35
HCFC1R1Q9NWW0 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.25■□□□□ 0.35
HCFC1R1Q9NWW0 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HCFC1R1Q9NWW0 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HCFC1R1Q9NWW0 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
HCFC1R1Q9NWW0 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC17.24■□□□□ 0.35
HCFC1R1Q9NWW0 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC17.24■□□□□ 0.35
HCFC1R1Q9NWW0 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
HCFC1R1Q9NWW0 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.24■□□□□ 0.35
HCFC1R1Q9NWW0 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HCFC1R1Q9NWW0 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
HCFC1R1Q9NWW0 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
HCFC1R1Q9NWW0 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HCFC1R1Q9NWW0 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HCFC1R1Q9NWW0 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HCFC1R1Q9NWW0 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HCFC1R1Q9NWW0 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC17.24■□□□□ 0.35
HCFC1R1Q9NWW0 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC17.24■□□□□ 0.35
HCFC1R1Q9NWW0 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HCFC1R1Q9NWW0 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
HCFC1R1Q9NWW0 MAX-210ENST00000555419 765 ntTSL 5 BASIC17.24■□□□□ 0.35
HCFC1R1Q9NWW0 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC17.24■□□□□ 0.35
HCFC1R1Q9NWW0 RPS15-212ENST00000593052 629 ntTSL 2 BASIC17.24■□□□□ 0.35
HCFC1R1Q9NWW0 AC027307.3-201ENST00000594262 1100 ntBASIC17.24■□□□□ 0.35
HCFC1R1Q9NWW0 AL133215.2-201ENST00000609242 977 ntBASIC17.24■□□□□ 0.35
HCFC1R1Q9NWW0 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
HCFC1R1Q9NWW0 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
HCFC1R1Q9NWW0 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HCFC1R1Q9NWW0 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
HCFC1R1Q9NWW0 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HCFC1R1Q9NWW0 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
HCFC1R1Q9NWW0 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HCFC1R1Q9NWW0 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
HCFC1R1Q9NWW0 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
HCFC1R1Q9NWW0 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC17.24■□□□□ 0.35
HCFC1R1Q9NWW0 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC17.24■□□□□ 0.35
HCFC1R1Q9NWW0 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC17.24■□□□□ 0.35
HCFC1R1Q9NWW0 AC141586.5-201ENST00000624546 2050 ntBASIC17.24■□□□□ 0.35
HCFC1R1Q9NWW0 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
HCFC1R1Q9NWW0 AC087499.5-201ENST00000452760 1342 ntBASIC17.23■□□□□ 0.35
HCFC1R1Q9NWW0 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
HCFC1R1Q9NWW0 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HCFC1R1Q9NWW0 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
HCFC1R1Q9NWW0 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
HCFC1R1Q9NWW0 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
HCFC1R1Q9NWW0 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.23■□□□□ 0.35
HCFC1R1Q9NWW0 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
HCFC1R1Q9NWW0 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
HCFC1R1Q9NWW0 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
HCFC1R1Q9NWW0 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC17.23■□□□□ 0.35
HCFC1R1Q9NWW0 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
HCFC1R1Q9NWW0 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
HCFC1R1Q9NWW0 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC17.23■□□□□ 0.35
HCFC1R1Q9NWW0 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC17.23■□□□□ 0.35
HCFC1R1Q9NWW0 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
HCFC1R1Q9NWW0 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC17.23■□□□□ 0.35
HCFC1R1Q9NWW0 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC17.23■□□□□ 0.35
HCFC1R1Q9NWW0 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC17.23■□□□□ 0.35
HCFC1R1Q9NWW0 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
HCFC1R1Q9NWW0 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC17.23■□□□□ 0.35
HCFC1R1Q9NWW0 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HCFC1R1Q9NWW0 AC004840.1-201ENST00000636359 365 ntBASIC17.23■□□□□ 0.35
HCFC1R1Q9NWW0 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HCFC1R1Q9NWW0 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC17.23■□□□□ 0.35
HCFC1R1Q9NWW0 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.23■□□□□ 0.35
HCFC1R1Q9NWW0 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC17.23■□□□□ 0.35
HCFC1R1Q9NWW0 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.23■□□□□ 0.35
HCFC1R1Q9NWW0 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
HCFC1R1Q9NWW0 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HCFC1R1Q9NWW0 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
HCFC1R1Q9NWW0 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
HCFC1R1Q9NWW0 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HCFC1R1Q9NWW0 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HCFC1R1Q9NWW0 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HCFC1R1Q9NWW0 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
HCFC1R1Q9NWW0 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
HCFC1R1Q9NWW0 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
HCFC1R1Q9NWW0 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HCFC1R1Q9NWW0 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
HCFC1R1Q9NWW0 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HCFC1R1Q9NWW0 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HCFC1R1Q9NWW0 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.22■□□□□ 0.35
HCFC1R1Q9NWW0 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC17.22■□□□□ 0.35
HCFC1R1Q9NWW0 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HCFC1R1Q9NWW0 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HCFC1R1Q9NWW0 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HCFC1R1Q9NWW0 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms