Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCM2LQ9NUG4 AC007967.3-201ENST00000434308 558 ntBASIC15.99■□□□□ 0.15
CCM2LQ9NUG4 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC15.99■□□□□ 0.15
CCM2LQ9NUG4 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC15.99■□□□□ 0.15
CCM2LQ9NUG4 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC15.99■□□□□ 0.15
CCM2LQ9NUG4 STK25P1-201ENST00000585406 838 ntBASIC15.99■□□□□ 0.15
CCM2LQ9NUG4 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC15.99■□□□□ 0.15
CCM2LQ9NUG4 LITAF-220ENST00000620789 692 ntTSL 5 BASIC15.99■□□□□ 0.15
CCM2LQ9NUG4 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CCM2LQ9NUG4 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC15.99■□□□□ 0.15
CCM2LQ9NUG4 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CCM2LQ9NUG4 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCM2LQ9NUG4 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC15.99■□□□□ 0.15
CCM2LQ9NUG4 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC15.99■□□□□ 0.15
CCM2LQ9NUG4 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
CCM2LQ9NUG4 TSPY26P-202ENST00000565928 3884 ntBASIC15.99■□□□□ 0.15
CCM2LQ9NUG4 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCM2LQ9NUG4 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCM2LQ9NUG4 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC15.99■□□□□ 0.15
CCM2LQ9NUG4 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCM2LQ9NUG4 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCM2LQ9NUG4 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
CCM2LQ9NUG4 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC15.99■□□□□ 0.15
CCM2LQ9NUG4 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
CCM2LQ9NUG4 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC15.99■□□□□ 0.15
CCM2LQ9NUG4 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCM2LQ9NUG4 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC15.99■□□□□ 0.15
CCM2LQ9NUG4 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
CCM2LQ9NUG4 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CCM2LQ9NUG4 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CCM2LQ9NUG4 AL596087.1-201ENST00000400979 1969 ntBASIC15.98■□□□□ 0.15
CCM2LQ9NUG4 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CCM2LQ9NUG4 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC15.98■□□□□ 0.15
CCM2LQ9NUG4 AL603832.2-201ENST00000566195 2125 ntBASIC15.98■□□□□ 0.15
CCM2LQ9NUG4 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC15.98■□□□□ 0.15
CCM2LQ9NUG4 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC15.98■□□□□ 0.15
CCM2LQ9NUG4 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
CCM2LQ9NUG4 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC15.98■□□□□ 0.15
CCM2LQ9NUG4 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CCM2LQ9NUG4 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CCM2LQ9NUG4 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC15.98■□□□□ 0.15
CCM2LQ9NUG4 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CCM2LQ9NUG4 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
CCM2LQ9NUG4 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC15.98■□□□□ 0.15
CCM2LQ9NUG4 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CCM2LQ9NUG4 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CCM2LQ9NUG4 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC15.98■□□□□ 0.15
CCM2LQ9NUG4 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CCM2LQ9NUG4 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC15.98■□□□□ 0.15
CCM2LQ9NUG4 KRT16P4-201ENST00000453883 522 ntBASIC15.98■□□□□ 0.15
CCM2LQ9NUG4 AP003733.1-201ENST00000491725 852 ntBASIC15.98■□□□□ 0.15
CCM2LQ9NUG4 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC15.98■□□□□ 0.15
CCM2LQ9NUG4 RNF126P1-202ENST00000569893 925 ntBASIC15.98■□□□□ 0.15
CCM2LQ9NUG4 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC15.98■□□□□ 0.15
CCM2LQ9NUG4 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CCM2LQ9NUG4 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CCM2LQ9NUG4 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC15.98■□□□□ 0.15
CCM2LQ9NUG4 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
CCM2LQ9NUG4 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
CCM2LQ9NUG4 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
CCM2LQ9NUG4 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CCM2LQ9NUG4 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CCM2LQ9NUG4 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CCM2LQ9NUG4 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC15.98■□□□□ 0.15
CCM2LQ9NUG4 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CCM2LQ9NUG4 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC15.98■□□□□ 0.15
CCM2LQ9NUG4 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CCM2LQ9NUG4 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC15.98■□□□□ 0.15
CCM2LQ9NUG4 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC15.98■□□□□ 0.15
CCM2LQ9NUG4 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CCM2LQ9NUG4 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCM2LQ9NUG4 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
CCM2LQ9NUG4 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC15.97■□□□□ 0.15
CCM2LQ9NUG4 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
CCM2LQ9NUG4 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCM2LQ9NUG4 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CCM2LQ9NUG4 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC15.97■□□□□ 0.15
CCM2LQ9NUG4 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCM2LQ9NUG4 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
CCM2LQ9NUG4 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC15.97■□□□□ 0.15
CCM2LQ9NUG4 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CCM2LQ9NUG4 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCM2LQ9NUG4 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CCM2LQ9NUG4 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
CCM2LQ9NUG4 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
CCM2LQ9NUG4 PMS2P1-201ENST00000431037 1228 ntBASIC15.97■□□□□ 0.15
CCM2LQ9NUG4 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC15.97■□□□□ 0.15
CCM2LQ9NUG4 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC15.97■□□□□ 0.15
CCM2LQ9NUG4 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC15.97■□□□□ 0.15
CCM2LQ9NUG4 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC15.97■□□□□ 0.15
CCM2LQ9NUG4 AC122714.2-201ENST00000502787 707 ntBASIC15.97■□□□□ 0.15
CCM2LQ9NUG4 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCM2LQ9NUG4 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC15.97■□□□□ 0.15
CCM2LQ9NUG4 AC074051.2-201ENST00000565115 352 ntBASIC15.97■□□□□ 0.15
CCM2LQ9NUG4 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
CCM2LQ9NUG4 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC15.97■□□□□ 0.15
CCM2LQ9NUG4 AL353801.3-201ENST00000609898 542 ntBASIC15.97■□□□□ 0.15
CCM2LQ9NUG4 NME4-212ENST00000621774 904 ntTSL 3 BASIC15.97■□□□□ 0.15
CCM2LQ9NUG4 AF228730.7-201ENST00000641842 219 ntBASIC15.97■□□□□ 0.15
CCM2LQ9NUG4 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms