Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RTN4Q9NQC3 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
RTN4Q9NQC3 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
RTN4Q9NQC3 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC19.87■□□□□ 0.77
RTN4Q9NQC3 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
RTN4Q9NQC3 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RTN4Q9NQC3 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RTN4Q9NQC3 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
RTN4Q9NQC3 HLA-DQB2-231ENST00000435145 2026 ntBASIC19.87■□□□□ 0.77
RTN4Q9NQC3 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RTN4Q9NQC3 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RTN4Q9NQC3 SLC25A1P2-201ENST00000430693 912 ntBASIC19.87■□□□□ 0.77
RTN4Q9NQC3 AL355355.2-201ENST00000442321 338 ntBASIC19.87■□□□□ 0.77
RTN4Q9NQC3 TSPY17P-201ENST00000450329 467 ntBASIC19.87■□□□□ 0.77
RTN4Q9NQC3 TSPY20P-201ENST00000450910 630 ntBASIC19.87■□□□□ 0.77
RTN4Q9NQC3 AC098590.1-201ENST00000468126 897 ntBASIC19.87■□□□□ 0.77
RTN4Q9NQC3 AP001412.1-201ENST00000608405 714 ntBASIC19.87■□□□□ 0.77
RTN4Q9NQC3 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RTN4Q9NQC3 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC19.87■□□□□ 0.77
RTN4Q9NQC3 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RTN4Q9NQC3 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
RTN4Q9NQC3 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RTN4Q9NQC3 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RTN4Q9NQC3 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
RTN4Q9NQC3 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RTN4Q9NQC3 AC006058.4-201ENST00000624016 1670 ntBASIC19.87■□□□□ 0.77
RTN4Q9NQC3 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
RTN4Q9NQC3 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RTN4Q9NQC3 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC19.87■□□□□ 0.77
RTN4Q9NQC3 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RTN4Q9NQC3 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RTN4Q9NQC3 ASL-204ENST00000395331 1538 ntTSL 5 BASIC19.86■□□□□ 0.77
RTN4Q9NQC3 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RTN4Q9NQC3 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC19.86■□□□□ 0.77
RTN4Q9NQC3 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC19.86■□□□□ 0.77
RTN4Q9NQC3 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC19.86■□□□□ 0.77
RTN4Q9NQC3 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
RTN4Q9NQC3 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC19.86■□□□□ 0.77
RTN4Q9NQC3 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
RTN4Q9NQC3 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RTN4Q9NQC3 COL6A4P2-202ENST00000504443 2753 ntBASIC19.86■□□□□ 0.77
RTN4Q9NQC3 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RTN4Q9NQC3 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RTN4Q9NQC3 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
RTN4Q9NQC3 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RTN4Q9NQC3 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RTN4Q9NQC3 AC010327.5-201ENST00000586923 3061 ntBASIC19.86■□□□□ 0.77
RTN4Q9NQC3 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RTN4Q9NQC3 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
RTN4Q9NQC3 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
RTN4Q9NQC3 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RTN4Q9NQC3 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
RTN4Q9NQC3 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC19.86■□□□□ 0.77
RTN4Q9NQC3 UBE2SP1-201ENST00000450587 669 ntBASIC19.86■□□□□ 0.77
RTN4Q9NQC3 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC19.86■□□□□ 0.77
RTN4Q9NQC3 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
RTN4Q9NQC3 MIR3180-4-201ENST00000582223 153 ntBASIC19.86■□□□□ 0.77
RTN4Q9NQC3 AC026471.5-201ENST00000615068 467 ntBASIC19.86■□□□□ 0.77
RTN4Q9NQC3 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RTN4Q9NQC3 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RTN4Q9NQC3 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC19.86■□□□□ 0.77
RTN4Q9NQC3 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
RTN4Q9NQC3 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RTN4Q9NQC3 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RTN4Q9NQC3 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
RTN4Q9NQC3 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RTN4Q9NQC3 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
RTN4Q9NQC3 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RTN4Q9NQC3 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
RTN4Q9NQC3 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RTN4Q9NQC3 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
RTN4Q9NQC3 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RTN4Q9NQC3 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RTN4Q9NQC3 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
RTN4Q9NQC3 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RTN4Q9NQC3 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
RTN4Q9NQC3 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RTN4Q9NQC3 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RTN4Q9NQC3 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RTN4Q9NQC3 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC19.85■□□□□ 0.77
RTN4Q9NQC3 RNU6-673P-201ENST00000365084 104 ntBASIC19.85■□□□□ 0.77
RTN4Q9NQC3 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC19.85■□□□□ 0.77
RTN4Q9NQC3 PGGT1BP2-201ENST00000398621 1028 ntBASIC19.85■□□□□ 0.77
RTN4Q9NQC3 PMCHL1-203ENST00000423301 697 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RTN4Q9NQC3 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC19.85■□□□□ 0.77
RTN4Q9NQC3 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC19.85■□□□□ 0.77
RTN4Q9NQC3 DENND3-207ENST00000518347 850 ntTSL 2 BASIC19.85■□□□□ 0.77
RTN4Q9NQC3 DUTP2-201ENST00000519164 463 ntBASIC19.85■□□□□ 0.77
RTN4Q9NQC3 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC19.85■□□□□ 0.77
RTN4Q9NQC3 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC19.85■□□□□ 0.77
RTN4Q9NQC3 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RTN4Q9NQC3 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
RTN4Q9NQC3 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RTN4Q9NQC3 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC19.85■□□□□ 0.77
RTN4Q9NQC3 CICP24-201ENST00000605464 2705 ntBASIC19.85■□□□□ 0.77
RTN4Q9NQC3 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC19.85■□□□□ 0.77
RTN4Q9NQC3 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RTN4Q9NQC3 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RTN4Q9NQC3 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
RTN4Q9NQC3 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms