Protein–RNA interactions for Protein: Q9HCX3

ZNF304, Zinc finger protein 304, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF304Q9HCX3 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
ZNF304Q9HCX3 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
ZNF304Q9HCX3 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
ZNF304Q9HCX3 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
ZNF304Q9HCX3 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
ZNF304Q9HCX3 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC15.91■□□□□ 0.14
ZNF304Q9HCX3 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
ZNF304Q9HCX3 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
ZNF304Q9HCX3 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
ZNF304Q9HCX3 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
ZNF304Q9HCX3 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
ZNF304Q9HCX3 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC15.91■□□□□ 0.14
ZNF304Q9HCX3 HARS-204ENST00000438307 1789 ntTSL 2 BASIC15.91■□□□□ 0.14
ZNF304Q9HCX3 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC15.91■□□□□ 0.14
ZNF304Q9HCX3 AC254562.1-201ENST00000417586 456 ntBASIC15.91■□□□□ 0.14
ZNF304Q9HCX3 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC15.91■□□□□ 0.14
ZNF304Q9HCX3 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
ZNF304Q9HCX3 PUS1-205ENST00000535067 838 ntTSL 3 BASIC15.91■□□□□ 0.14
ZNF304Q9HCX3 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC15.91■□□□□ 0.14
ZNF304Q9HCX3 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
ZNF304Q9HCX3 AL596442.2-201ENST00000610240 980 ntBASIC15.91■□□□□ 0.14
ZNF304Q9HCX3 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC15.91■□□□□ 0.14
ZNF304Q9HCX3 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
ZNF304Q9HCX3 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
ZNF304Q9HCX3 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
ZNF304Q9HCX3 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
ZNF304Q9HCX3 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC15.91■□□□□ 0.14
ZNF304Q9HCX3 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
ZNF304Q9HCX3 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
ZNF304Q9HCX3 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC15.91■□□□□ 0.14
ZNF304Q9HCX3 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC15.91■□□□□ 0.14
ZNF304Q9HCX3 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
ZNF304Q9HCX3 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
ZNF304Q9HCX3 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
ZNF304Q9HCX3 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC15.91■□□□□ 0.14
ZNF304Q9HCX3 BANP-227ENST00000626016 2144 ntTSL 2 BASIC15.91■□□□□ 0.14
ZNF304Q9HCX3 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
ZNF304Q9HCX3 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
ZNF304Q9HCX3 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC15.91■□□□□ 0.14
ZNF304Q9HCX3 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ZNF304Q9HCX3 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
ZNF304Q9HCX3 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
ZNF304Q9HCX3 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
ZNF304Q9HCX3 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ZNF304Q9HCX3 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
ZNF304Q9HCX3 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ZNF304Q9HCX3 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
ZNF304Q9HCX3 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
ZNF304Q9HCX3 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
ZNF304Q9HCX3 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ZNF304Q9HCX3 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC15.9■□□□□ 0.14
ZNF304Q9HCX3 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC15.9■□□□□ 0.14
ZNF304Q9HCX3 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ZNF304Q9HCX3 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC15.9■□□□□ 0.14
ZNF304Q9HCX3 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC15.9■□□□□ 0.14
ZNF304Q9HCX3 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC15.9■□□□□ 0.14
ZNF304Q9HCX3 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC15.9■□□□□ 0.14
ZNF304Q9HCX3 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
ZNF304Q9HCX3 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
ZNF304Q9HCX3 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC15.9■□□□□ 0.14
ZNF304Q9HCX3 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC15.9■□□□□ 0.14
ZNF304Q9HCX3 MTRF1LP2-201ENST00000506027 1122 ntBASIC15.9■□□□□ 0.14
ZNF304Q9HCX3 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
ZNF304Q9HCX3 CD7-202ENST00000578509 925 ntTSL 3 BASIC15.9■□□□□ 0.14
ZNF304Q9HCX3 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
ZNF304Q9HCX3 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
ZNF304Q9HCX3 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
ZNF304Q9HCX3 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC15.9■□□□□ 0.14
ZNF304Q9HCX3 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ZNF304Q9HCX3 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ZNF304Q9HCX3 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
ZNF304Q9HCX3 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ZNF304Q9HCX3 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
ZNF304Q9HCX3 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
ZNF304Q9HCX3 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
ZNF304Q9HCX3 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC15.9■□□□□ 0.14
ZNF304Q9HCX3 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ZNF304Q9HCX3 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
ZNF304Q9HCX3 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC15.9■□□□□ 0.14
ZNF304Q9HCX3 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
ZNF304Q9HCX3 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
ZNF304Q9HCX3 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC15.89■□□□□ 0.13
ZNF304Q9HCX3 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ZNF304Q9HCX3 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
ZNF304Q9HCX3 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC15.89■□□□□ 0.13
ZNF304Q9HCX3 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
ZNF304Q9HCX3 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
ZNF304Q9HCX3 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
ZNF304Q9HCX3 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
ZNF304Q9HCX3 AC092068.3-201ENST00000587894 2016 ntBASIC15.89■□□□□ 0.13
ZNF304Q9HCX3 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
ZNF304Q9HCX3 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ZNF304Q9HCX3 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
ZNF304Q9HCX3 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC15.89■□□□□ 0.13
ZNF304Q9HCX3 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
ZNF304Q9HCX3 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
ZNF304Q9HCX3 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
ZNF304Q9HCX3 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
ZNF304Q9HCX3 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ZNF304Q9HCX3 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 62.6 ms