Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RNF41Q9H4P4 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RNF41Q9H4P4 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
RNF41Q9H4P4 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RNF41Q9H4P4 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC19.69■□□□□ 0.74
RNF41Q9H4P4 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RNF41Q9H4P4 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RNF41Q9H4P4 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC19.69■□□□□ 0.74
RNF41Q9H4P4 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RNF41Q9H4P4 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
RNF41Q9H4P4 WASH6P-202ENST00000359512 1437 ntBASIC19.69■□□□□ 0.74
RNF41Q9H4P4 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RNF41Q9H4P4 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RNF41Q9H4P4 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
RNF41Q9H4P4 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC19.69■□□□□ 0.74
RNF41Q9H4P4 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC19.69■□□□□ 0.74
RNF41Q9H4P4 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RNF41Q9H4P4 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RNF41Q9H4P4 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RNF41Q9H4P4 AL671277.1-201ENST00000429656 993 ntBASIC19.69■□□□□ 0.74
RNF41Q9H4P4 CEND1P1-201ENST00000451006 455 ntBASIC19.69■□□□□ 0.74
RNF41Q9H4P4 DHDH-204ENST00000523250 634 ntTSL 5 BASIC19.69■□□□□ 0.74
RNF41Q9H4P4 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC19.69■□□□□ 0.74
RNF41Q9H4P4 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC19.69■□□□□ 0.74
RNF41Q9H4P4 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC19.69■□□□□ 0.74
RNF41Q9H4P4 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC19.69■□□□□ 0.74
RNF41Q9H4P4 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC19.69■□□□□ 0.74
RNF41Q9H4P4 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
RNF41Q9H4P4 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC19.69■□□□□ 0.74
RNF41Q9H4P4 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
RNF41Q9H4P4 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
RNF41Q9H4P4 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
RNF41Q9H4P4 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RNF41Q9H4P4 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
RNF41Q9H4P4 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC19.69■□□□□ 0.74
RNF41Q9H4P4 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RNF41Q9H4P4 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
RNF41Q9H4P4 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
RNF41Q9H4P4 AKAP8P1-201ENST00000434743 1349 ntBASIC19.69■□□□□ 0.74
RNF41Q9H4P4 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RNF41Q9H4P4 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC19.69■□□□□ 0.74
RNF41Q9H4P4 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC19.69■□□□□ 0.74
RNF41Q9H4P4 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
RNF41Q9H4P4 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RNF41Q9H4P4 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
RNF41Q9H4P4 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RNF41Q9H4P4 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
RNF41Q9H4P4 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RNF41Q9H4P4 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RNF41Q9H4P4 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RNF41Q9H4P4 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RNF41Q9H4P4 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
RNF41Q9H4P4 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RNF41Q9H4P4 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC19.68■□□□□ 0.74
RNF41Q9H4P4 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC19.68■□□□□ 0.74
RNF41Q9H4P4 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC19.68■□□□□ 0.74
RNF41Q9H4P4 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RNF41Q9H4P4 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RNF41Q9H4P4 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
RNF41Q9H4P4 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC19.68■□□□□ 0.74
RNF41Q9H4P4 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RNF41Q9H4P4 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RNF41Q9H4P4 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
RNF41Q9H4P4 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
RNF41Q9H4P4 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RNF41Q9H4P4 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
RNF41Q9H4P4 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RNF41Q9H4P4 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
RNF41Q9H4P4 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
RNF41Q9H4P4 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RNF41Q9H4P4 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
RNF41Q9H4P4 AL031731.1-201ENST00000642131 2094 ntBASIC19.67■□□□□ 0.74
RNF41Q9H4P4 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF41Q9H4P4 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF41Q9H4P4 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF41Q9H4P4 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF41Q9H4P4 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF41Q9H4P4 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC19.67■□□□□ 0.74
RNF41Q9H4P4 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
RNF41Q9H4P4 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
RNF41Q9H4P4 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
RNF41Q9H4P4 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC19.67■□□□□ 0.74
RNF41Q9H4P4 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC19.67■□□□□ 0.74
RNF41Q9H4P4 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RNF41Q9H4P4 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC19.67■□□□□ 0.74
RNF41Q9H4P4 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
RNF41Q9H4P4 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF41Q9H4P4 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RNF41Q9H4P4 DPM2-202ENST00000373110 738 ntTSL 2 BASIC19.67■□□□□ 0.74
RNF41Q9H4P4 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC19.67■□□□□ 0.74
RNF41Q9H4P4 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC19.67■□□□□ 0.74
RNF41Q9H4P4 ADH5P3-201ENST00000433842 1137 ntBASIC19.67■□□□□ 0.74
RNF41Q9H4P4 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC19.67■□□□□ 0.74
RNF41Q9H4P4 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
RNF41Q9H4P4 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC19.67■□□□□ 0.74
RNF41Q9H4P4 RN7SL589P-201ENST00000481268 310 ntBASIC19.67■□□□□ 0.74
RNF41Q9H4P4 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC19.67■□□□□ 0.74
RNF41Q9H4P4 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RNF41Q9H4P4 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
RNF41Q9H4P4 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms