Protein–RNA interactions for Protein: Q9BQW3

EBF4, Transcription factor COE4, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF4Q9BQW3 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
EBF4Q9BQW3 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
EBF4Q9BQW3 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
EBF4Q9BQW3 AL512652.2-201ENST00000625156 1716 ntBASIC16.35■□□□□ 0.21
EBF4Q9BQW3 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
EBF4Q9BQW3 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
EBF4Q9BQW3 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC16.35■□□□□ 0.21
EBF4Q9BQW3 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC16.35■□□□□ 0.21
EBF4Q9BQW3 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
EBF4Q9BQW3 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.35■□□□□ 0.21
EBF4Q9BQW3 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC16.35■□□□□ 0.21
EBF4Q9BQW3 AC097637.2-201ENST00000624096 1997 ntBASIC16.35■□□□□ 0.21
EBF4Q9BQW3 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
EBF4Q9BQW3 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
EBF4Q9BQW3 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
EBF4Q9BQW3 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
EBF4Q9BQW3 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
EBF4Q9BQW3 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
EBF4Q9BQW3 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
EBF4Q9BQW3 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
EBF4Q9BQW3 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
EBF4Q9BQW3 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
EBF4Q9BQW3 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC16.34■□□□□ 0.21
EBF4Q9BQW3 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC16.34■□□□□ 0.21
EBF4Q9BQW3 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
EBF4Q9BQW3 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
EBF4Q9BQW3 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
EBF4Q9BQW3 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
EBF4Q9BQW3 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
EBF4Q9BQW3 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC16.34■□□□□ 0.21
EBF4Q9BQW3 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
EBF4Q9BQW3 AC005521.1-201ENST00000393351 872 ntBASIC16.34■□□□□ 0.21
EBF4Q9BQW3 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
EBF4Q9BQW3 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
EBF4Q9BQW3 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC16.34■□□□□ 0.21
EBF4Q9BQW3 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC16.34■□□□□ 0.21
EBF4Q9BQW3 AK4P3-201ENST00000418260 669 ntBASIC16.34■□□□□ 0.21
EBF4Q9BQW3 KRT18P57-201ENST00000443599 1254 ntBASIC16.34■□□□□ 0.21
EBF4Q9BQW3 SIGLEC30P-201ENST00000455569 941 ntBASIC16.34■□□□□ 0.21
EBF4Q9BQW3 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC16.34■□□□□ 0.21
EBF4Q9BQW3 DET1-205ENST00000558413 583 ntTSL 4 BASIC16.34■□□□□ 0.21
EBF4Q9BQW3 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC16.34■□□□□ 0.21
EBF4Q9BQW3 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
EBF4Q9BQW3 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC16.34■□□□□ 0.21
EBF4Q9BQW3 AC012306.2-201ENST00000609350 630 ntBASIC16.34■□□□□ 0.21
EBF4Q9BQW3 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
EBF4Q9BQW3 AL136379.1-201ENST00000623471 2642 ntBASIC16.34■□□□□ 0.21
EBF4Q9BQW3 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
EBF4Q9BQW3 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
EBF4Q9BQW3 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC16.34■□□□□ 0.21
EBF4Q9BQW3 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
EBF4Q9BQW3 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
EBF4Q9BQW3 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC16.34■□□□□ 0.21
EBF4Q9BQW3 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC16.34■□□□□ 0.21
EBF4Q9BQW3 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.21
EBF4Q9BQW3 REXO1L8P-201ENST00000604378 1897 ntBASIC16.33■□□□□ 0.21
EBF4Q9BQW3 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
EBF4Q9BQW3 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
EBF4Q9BQW3 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
EBF4Q9BQW3 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
EBF4Q9BQW3 AL031731.1-201ENST00000642131 2094 ntBASIC16.33■□□□□ 0.21
EBF4Q9BQW3 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
EBF4Q9BQW3 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
EBF4Q9BQW3 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
EBF4Q9BQW3 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
EBF4Q9BQW3 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
EBF4Q9BQW3 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC16.33■□□□□ 0.2
EBF4Q9BQW3 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC16.33■□□□□ 0.2
EBF4Q9BQW3 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
EBF4Q9BQW3 AL020989.1-201ENST00000422979 469 ntBASIC16.33■□□□□ 0.2
EBF4Q9BQW3 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC16.33■□□□□ 0.2
EBF4Q9BQW3 AC092647.4-201ENST00000457211 535 ntBASIC16.33■□□□□ 0.2
EBF4Q9BQW3 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
EBF4Q9BQW3 TP73-AS1-210ENST00000637775 1455 ntBASIC16.33■□□□□ 0.2
EBF4Q9BQW3 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC16.33■□□□□ 0.2
EBF4Q9BQW3 AL356309.3-201ENST00000624132 1934 ntBASIC16.33■□□□□ 0.2
EBF4Q9BQW3 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
EBF4Q9BQW3 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC16.33■□□□□ 0.2
EBF4Q9BQW3 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
EBF4Q9BQW3 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
EBF4Q9BQW3 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC16.32■□□□□ 0.2
EBF4Q9BQW3 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
EBF4Q9BQW3 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
EBF4Q9BQW3 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
EBF4Q9BQW3 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
EBF4Q9BQW3 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16.32■□□□□ 0.2
EBF4Q9BQW3 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
EBF4Q9BQW3 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC16.32■□□□□ 0.2
EBF4Q9BQW3 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
EBF4Q9BQW3 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
EBF4Q9BQW3 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC16.32■□□□□ 0.2
EBF4Q9BQW3 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
EBF4Q9BQW3 AC243591.1-201ENST00000452967 1364 ntBASIC16.32■□□□□ 0.2
EBF4Q9BQW3 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC16.32■□□□□ 0.2
EBF4Q9BQW3 WARS-232ENST00000556645 2508 ntTSL 5 BASIC16.32■□□□□ 0.2
EBF4Q9BQW3 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC16.32■□□□□ 0.2
EBF4Q9BQW3 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC16.32■□□□□ 0.2
EBF4Q9BQW3 AC011498.5-201ENST00000592027 486 ntBASIC16.32■□□□□ 0.2
EBF4Q9BQW3 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
EBF4Q9BQW3 NDUFV2-AS1-203ENST00000608008 779 ntBASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms