Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 FAM58DP-201ENST00000428076 619 ntBASIC17.49■□□□□ 0.39
SMOQ99835 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC17.49■□□□□ 0.39
SMOQ99835 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC17.49■□□□□ 0.39
SMOQ99835 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC17.49■□□□□ 0.39
SMOQ99835 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC17.49■□□□□ 0.39
SMOQ99835 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC17.49■□□□□ 0.39
SMOQ99835 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC17.49■□□□□ 0.39
SMOQ99835 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SMOQ99835 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SMOQ99835 RPS15-207ENST00000591032 550 ntTSL 3 BASIC17.49■□□□□ 0.39
SMOQ99835 AC027307.2-201ENST00000591252 911 ntBASIC17.49■□□□□ 0.39
SMOQ99835 RPS15-212ENST00000593052 629 ntTSL 2 BASIC17.49■□□□□ 0.39
SMOQ99835 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SMOQ99835 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
SMOQ99835 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC17.49■□□□□ 0.39
SMOQ99835 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC17.49■□□□□ 0.39
SMOQ99835 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.49■□□□□ 0.39
SMOQ99835 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
SMOQ99835 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SMOQ99835 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SMOQ99835 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SMOQ99835 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.49■□□□□ 0.39
SMOQ99835 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SMOQ99835 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SMOQ99835 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SMOQ99835 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SMOQ99835 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
SMOQ99835 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.49■□□□□ 0.39
SMOQ99835 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SMOQ99835 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC17.48■□□□□ 0.39
SMOQ99835 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC17.48■□□□□ 0.39
SMOQ99835 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
SMOQ99835 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
SMOQ99835 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SMOQ99835 AC011676.5-201ENST00000624864 2660 ntBASIC17.48■□□□□ 0.39
SMOQ99835 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC17.48■□□□□ 0.39
SMOQ99835 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SMOQ99835 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SMOQ99835 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SMOQ99835 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SMOQ99835 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SMOQ99835 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SMOQ99835 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
SMOQ99835 AL139400.1-201ENST00000366220 510 ntBASIC17.48■□□□□ 0.39
SMOQ99835 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SMOQ99835 CBR1-202ENST00000399191 838 ntTSL 3 BASIC17.48■□□□□ 0.39
SMOQ99835 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SMOQ99835 LBH-203ENST00000404397 543 ntTSL 4 BASIC17.48■□□□□ 0.39
SMOQ99835 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SMOQ99835 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC17.48■□□□□ 0.39
SMOQ99835 AC005237.2-201ENST00000434368 219 ntBASIC17.48■□□□□ 0.39
SMOQ99835 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SMOQ99835 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC17.48■□□□□ 0.39
SMOQ99835 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC17.48■□□□□ 0.39
SMOQ99835 SSH2-211ENST00000590153 570 ntTSL 4 BASIC17.48■□□□□ 0.39
SMOQ99835 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SMOQ99835 AC008267.7-201ENST00000624570 1194 ntBASIC17.48■□□□□ 0.39
SMOQ99835 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC17.48■□□□□ 0.39
SMOQ99835 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC17.48■□□□□ 0.39
SMOQ99835 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
SMOQ99835 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
SMOQ99835 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SMOQ99835 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
SMOQ99835 GPAA1P2-202ENST00000606848 1787 ntBASIC17.48■□□□□ 0.39
SMOQ99835 KRT18P28-201ENST00000453838 1332 ntBASIC17.47■□□□□ 0.39
SMOQ99835 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
SMOQ99835 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SMOQ99835 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC17.47■□□□□ 0.39
SMOQ99835 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SMOQ99835 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC17.47■□□□□ 0.39
SMOQ99835 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SMOQ99835 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SMOQ99835 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
SMOQ99835 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
SMOQ99835 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
SMOQ99835 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SMOQ99835 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SMOQ99835 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SMOQ99835 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC17.47■□□□□ 0.39
SMOQ99835 AC023141.5-201ENST00000458585 616 ntBASIC17.47■□□□□ 0.39
SMOQ99835 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SMOQ99835 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SMOQ99835 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC17.47■□□□□ 0.39
SMOQ99835 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC17.47■□□□□ 0.39
SMOQ99835 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC17.47■□□□□ 0.39
SMOQ99835 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SMOQ99835 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC17.47■□□□□ 0.39
SMOQ99835 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
SMOQ99835 AC092171.3-201ENST00000610122 2651 ntBASIC17.47■□□□□ 0.39
SMOQ99835 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SMOQ99835 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SMOQ99835 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SMOQ99835 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC17.47■□□□□ 0.39
SMOQ99835 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SMOQ99835 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SMOQ99835 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SMOQ99835 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
SMOQ99835 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.46■□□□□ 0.39
SMOQ99835 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.39
SMOQ99835 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms