Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC21.82■■□□□ 1.08
ABCA3Q99758 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
ABCA3Q99758 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC21.82■■□□□ 1.08
ABCA3Q99758 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC21.82■■□□□ 1.08
ABCA3Q99758 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
ABCA3Q99758 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
ABCA3Q99758 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
ABCA3Q99758 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC21.82■■□□□ 1.08
ABCA3Q99758 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
ABCA3Q99758 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
ABCA3Q99758 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
ABCA3Q99758 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC21.82■■□□□ 1.08
ABCA3Q99758 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
ABCA3Q99758 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
ABCA3Q99758 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
ABCA3Q99758 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC21.81■■□□□ 1.08
ABCA3Q99758 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
ABCA3Q99758 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC21.81■■□□□ 1.08
ABCA3Q99758 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC21.81■■□□□ 1.08
ABCA3Q99758 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC21.81■■□□□ 1.08
ABCA3Q99758 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC21.81■■□□□ 1.08
ABCA3Q99758 AC244669.2-201ENST00000612320 853 ntBASIC21.81■■□□□ 1.08
ABCA3Q99758 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC21.81■■□□□ 1.08
ABCA3Q99758 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC21.81■■□□□ 1.08
ABCA3Q99758 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC21.81■■□□□ 1.08
ABCA3Q99758 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
ABCA3Q99758 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
ABCA3Q99758 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
ABCA3Q99758 GPAA1P2-202ENST00000606848 1787 ntBASIC21.81■■□□□ 1.08
ABCA3Q99758 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC21.81■■□□□ 1.08
ABCA3Q99758 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC21.81■■□□□ 1.08
ABCA3Q99758 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
ABCA3Q99758 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC21.81■■□□□ 1.08
ABCA3Q99758 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC21.81■■□□□ 1.08
ABCA3Q99758 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
ABCA3Q99758 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
ABCA3Q99758 TP73-213ENST00000604479 1623 ntTSL 5 BASIC21.81■■□□□ 1.08
ABCA3Q99758 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
ABCA3Q99758 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
ABCA3Q99758 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
ABCA3Q99758 AL031731.1-201ENST00000642131 2094 ntBASIC21.8■■□□□ 1.08
ABCA3Q99758 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
ABCA3Q99758 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
ABCA3Q99758 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC21.8■■□□□ 1.08
ABCA3Q99758 AL022328.1-201ENST00000610050 478 ntBASIC21.8■■□□□ 1.08
ABCA3Q99758 AL139011.1-202ENST00000642063 584 ntBASIC21.8■■□□□ 1.08
ABCA3Q99758 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
ABCA3Q99758 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
ABCA3Q99758 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
ABCA3Q99758 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
ABCA3Q99758 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
ABCA3Q99758 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC21.8■■□□□ 1.08
ABCA3Q99758 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
ABCA3Q99758 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
ABCA3Q99758 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
ABCA3Q99758 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
ABCA3Q99758 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC21.8■■□□□ 1.08
ABCA3Q99758 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
ABCA3Q99758 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
ABCA3Q99758 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
ABCA3Q99758 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC21.8■■□□□ 1.08
ABCA3Q99758 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC21.8■■□□□ 1.08
ABCA3Q99758 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC21.8■■□□□ 1.08
ABCA3Q99758 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
ABCA3Q99758 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
ABCA3Q99758 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
ABCA3Q99758 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
ABCA3Q99758 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ABCA3Q99758 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
ABCA3Q99758 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
ABCA3Q99758 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC21.79■■□□□ 1.08
ABCA3Q99758 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
ABCA3Q99758 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
ABCA3Q99758 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ABCA3Q99758 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
ABCA3Q99758 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ABCA3Q99758 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC21.79■■□□□ 1.08
ABCA3Q99758 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
ABCA3Q99758 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC21.79■■□□□ 1.08
ABCA3Q99758 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
ABCA3Q99758 TDH-203ENST00000531764 1110 ntBASIC21.79■■□□□ 1.08
ABCA3Q99758 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC21.79■■□□□ 1.08
ABCA3Q99758 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
ABCA3Q99758 DUX4L45-201ENST00000566406 1057 ntBASIC21.79■■□□□ 1.08
ABCA3Q99758 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC21.79■■□□□ 1.08
ABCA3Q99758 BTNL10-201ENST00000595971 695 ntBASIC21.79■■□□□ 1.08
ABCA3Q99758 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
ABCA3Q99758 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
ABCA3Q99758 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ABCA3Q99758 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ABCA3Q99758 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC21.78■■□□□ 1.08
ABCA3Q99758 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
ABCA3Q99758 RELA-227ENST00000615805 2236 ntTSL 5 BASIC21.78■■□□□ 1.08
ABCA3Q99758 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC21.78■■□□□ 1.08
ABCA3Q99758 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC21.78■■□□□ 1.08
ABCA3Q99758 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC21.78■■□□□ 1.08
ABCA3Q99758 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC21.78■■□□□ 1.08
ABCA3Q99758 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC21.78■■□□□ 1.08
ABCA3Q99758 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC21.78■■□□□ 1.08
ABCA3Q99758 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms