Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
SPENQ96T58 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SPENQ96T58 GNE-204ENST00000539208 2190 ntTSL 2 BASIC14.88□□□□□ -0.03
SPENQ96T58 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC14.88□□□□□ -0.03
SPENQ96T58 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
SPENQ96T58 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
SPENQ96T58 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SPENQ96T58 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SPENQ96T58 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
SPENQ96T58 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SPENQ96T58 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC14.87□□□□□ -0.03
SPENQ96T58 AC098614.1-201ENST00000368528 745 ntBASIC14.87□□□□□ -0.03
SPENQ96T58 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC14.87□□□□□ -0.03
SPENQ96T58 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
SPENQ96T58 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SPENQ96T58 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC14.87□□□□□ -0.03
SPENQ96T58 AC044860.1-202ENST00000559481 777 ntBASIC14.87□□□□□ -0.03
SPENQ96T58 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC14.87□□□□□ -0.03
SPENQ96T58 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC14.87□□□□□ -0.03
SPENQ96T58 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SPENQ96T58 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
SPENQ96T58 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC14.87□□□□□ -0.03
SPENQ96T58 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC14.87□□□□□ -0.03
SPENQ96T58 PCDHB18P-201ENST00000524813 2368 ntBASIC14.87□□□□□ -0.03
SPENQ96T58 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC14.87□□□□□ -0.03
SPENQ96T58 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC14.87□□□□□ -0.03
SPENQ96T58 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SPENQ96T58 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
SPENQ96T58 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SPENQ96T58 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
SPENQ96T58 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
SPENQ96T58 PARP8-218ENST00000513738 596 ntTSL 4 BASIC14.87□□□□□ -0.03
SPENQ96T58 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
SPENQ96T58 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
SPENQ96T58 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC14.87□□□□□ -0.03
SPENQ96T58 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC14.87□□□□□ -0.03
SPENQ96T58 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
SPENQ96T58 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SPENQ96T58 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SPENQ96T58 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
SPENQ96T58 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
SPENQ96T58 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SPENQ96T58 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
SPENQ96T58 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
SPENQ96T58 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
SPENQ96T58 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC14.86□□□□□ -0.03
SPENQ96T58 5S_rRNA.22-201ENST00000614916 106 ntBASIC14.86□□□□□ -0.03
SPENQ96T58 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
SPENQ96T58 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SPENQ96T58 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SPENQ96T58 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SPENQ96T58 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
SPENQ96T58 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SPENQ96T58 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SPENQ96T58 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC14.86□□□□□ -0.03
SPENQ96T58 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
SPENQ96T58 AC116353.5-201ENST00000638148 1699 ntBASIC14.86□□□□□ -0.03
SPENQ96T58 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SPENQ96T58 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
SPENQ96T58 MIR1908-201ENST00000410394 80 ntBASIC14.86□□□□□ -0.03
SPENQ96T58 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SPENQ96T58 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC14.86□□□□□ -0.03
SPENQ96T58 AC091167.2-201ENST00000579581 588 ntBASIC14.86□□□□□ -0.03
SPENQ96T58 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC14.86□□□□□ -0.03
SPENQ96T58 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SPENQ96T58 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SPENQ96T58 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC14.85□□□□□ -0.03
SPENQ96T58 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
SPENQ96T58 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
SPENQ96T58 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SPENQ96T58 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
SPENQ96T58 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
SPENQ96T58 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC14.85□□□□□ -0.03
SPENQ96T58 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC14.85□□□□□ -0.03
SPENQ96T58 MYCLP2-201ENST00000449268 967 ntBASIC14.85□□□□□ -0.03
SPENQ96T58 AL589987.1-201ENST00000453380 819 ntBASIC14.85□□□□□ -0.03
SPENQ96T58 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC14.85□□□□□ -0.03
SPENQ96T58 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
SPENQ96T58 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SPENQ96T58 CETN4P-206ENST00000642099 2168 ntBASIC14.85□□□□□ -0.03
SPENQ96T58 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC14.85□□□□□ -0.03
SPENQ96T58 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SPENQ96T58 TUBB1P2-201ENST00000422712 1306 ntBASIC14.85□□□□□ -0.03
SPENQ96T58 TUBB1P1-201ENST00000503144 1300 ntBASIC14.85□□□□□ -0.03
SPENQ96T58 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SPENQ96T58 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
SPENQ96T58 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
SPENQ96T58 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SPENQ96T58 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SPENQ96T58 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC14.85□□□□□ -0.03
SPENQ96T58 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SPENQ96T58 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC14.85□□□□□ -0.03
SPENQ96T58 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
SPENQ96T58 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
SPENQ96T58 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SPENQ96T58 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SPENQ96T58 BANP-227ENST00000626016 2144 ntTSL 2 BASIC14.85□□□□□ -0.03
SPENQ96T58 CA12-203ENST00000422263 2556 ntTSL 2 BASIC14.85□□□□□ -0.03
SPENQ96T58 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC14.85□□□□□ -0.03
SPENQ96T58 MTND6P24-201ENST00000440466 518 ntBASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms