Protein–RNA interactions for Protein: Q96L08

SUSD3, Sushi domain-containing protein 3, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUSD3Q96L08 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SUSD3Q96L08 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SUSD3Q96L08 AMT-206ENST00000458307 1860 ntTSL 2 BASIC17.62■□□□□ 0.41
SUSD3Q96L08 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SUSD3Q96L08 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SUSD3Q96L08 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC17.62■□□□□ 0.41
SUSD3Q96L08 FO538757.1-201ENST00000623083 1397 ntBASIC17.62■□□□□ 0.41
SUSD3Q96L08 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
SUSD3Q96L08 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SUSD3Q96L08 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.62■□□□□ 0.41
SUSD3Q96L08 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17.62■□□□□ 0.41
SUSD3Q96L08 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SUSD3Q96L08 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SUSD3Q96L08 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
SUSD3Q96L08 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.62■□□□□ 0.41
SUSD3Q96L08 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SUSD3Q96L08 AL603756.1-201ENST00000606511 2163 ntBASIC17.62■□□□□ 0.41
SUSD3Q96L08 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.62■□□□□ 0.41
SUSD3Q96L08 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
SUSD3Q96L08 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SUSD3Q96L08 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.61■□□□□ 0.41
SUSD3Q96L08 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SUSD3Q96L08 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
SUSD3Q96L08 FZD10-202ENST00000539839 3282 ntBASIC17.61■□□□□ 0.41
SUSD3Q96L08 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SUSD3Q96L08 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SUSD3Q96L08 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
SUSD3Q96L08 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SUSD3Q96L08 AL031731.1-201ENST00000642131 2094 ntBASIC17.61■□□□□ 0.41
SUSD3Q96L08 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SUSD3Q96L08 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SUSD3Q96L08 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SUSD3Q96L08 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SUSD3Q96L08 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC17.61■□□□□ 0.41
SUSD3Q96L08 TREML5P-201ENST00000421694 576 ntBASIC17.61■□□□□ 0.41
SUSD3Q96L08 HLA-J-202ENST00000469281 1241 ntBASIC17.61■□□□□ 0.41
SUSD3Q96L08 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC17.61■□□□□ 0.41
SUSD3Q96L08 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC17.61■□□□□ 0.41
SUSD3Q96L08 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC17.61■□□□□ 0.41
SUSD3Q96L08 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC17.61■□□□□ 0.41
SUSD3Q96L08 FHL2-212ENST00000607522 759 ntTSL 2 BASIC17.61■□□□□ 0.41
SUSD3Q96L08 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC17.61■□□□□ 0.41
SUSD3Q96L08 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
SUSD3Q96L08 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC17.61■□□□□ 0.41
SUSD3Q96L08 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
SUSD3Q96L08 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
SUSD3Q96L08 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC17.61■□□□□ 0.41
SUSD3Q96L08 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
SUSD3Q96L08 AC006538.1-201ENST00000567905 1585 ntBASIC17.61■□□□□ 0.41
SUSD3Q96L08 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
SUSD3Q96L08 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SUSD3Q96L08 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.61■□□□□ 0.41
SUSD3Q96L08 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.61■□□□□ 0.41
SUSD3Q96L08 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC17.61■□□□□ 0.41
SUSD3Q96L08 GPAA1P2-202ENST00000606848 1787 ntBASIC17.61■□□□□ 0.41
SUSD3Q96L08 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SUSD3Q96L08 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SUSD3Q96L08 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SUSD3Q96L08 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
SUSD3Q96L08 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SUSD3Q96L08 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SUSD3Q96L08 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
SUSD3Q96L08 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SUSD3Q96L08 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SUSD3Q96L08 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SUSD3Q96L08 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
SUSD3Q96L08 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SUSD3Q96L08 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SUSD3Q96L08 AC069120.2-201ENST00000524091 540 ntBASIC17.6■□□□□ 0.41
SUSD3Q96L08 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC17.6■□□□□ 0.41
SUSD3Q96L08 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC17.6■□□□□ 0.41
SUSD3Q96L08 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SUSD3Q96L08 AC007967.4-201ENST00000614700 386 ntBASIC17.6■□□□□ 0.41
SUSD3Q96L08 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
SUSD3Q96L08 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
SUSD3Q96L08 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC17.6■□□□□ 0.41
SUSD3Q96L08 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SUSD3Q96L08 AC105020.1-201ENST00000435356 2205 ntBASIC17.6■□□□□ 0.41
SUSD3Q96L08 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SUSD3Q96L08 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.6■□□□□ 0.41
SUSD3Q96L08 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SUSD3Q96L08 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
SUSD3Q96L08 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SUSD3Q96L08 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
SUSD3Q96L08 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SUSD3Q96L08 AC005915.1-201ENST00000624912 2018 ntBASIC17.59■□□□□ 0.41
SUSD3Q96L08 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SUSD3Q96L08 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SUSD3Q96L08 GOLGA2P9-201ENST00000596977 1937 ntBASIC17.59■□□□□ 0.41
SUSD3Q96L08 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SUSD3Q96L08 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SUSD3Q96L08 GGT4P-201ENST00000623672 1708 ntBASIC17.59■□□□□ 0.41
SUSD3Q96L08 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SUSD3Q96L08 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SUSD3Q96L08 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC17.59■□□□□ 0.41
SUSD3Q96L08 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
SUSD3Q96L08 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SUSD3Q96L08 CENPM-205ENST00000404067 905 ntTSL 3 BASIC17.59■□□□□ 0.41
SUSD3Q96L08 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC17.59■□□□□ 0.41
SUSD3Q96L08 BASP1P1-201ENST00000430708 665 ntBASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms