Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC16.34■□□□□ 0.21
PDLIM5Q96HC4 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
PDLIM5Q96HC4 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PDLIM5Q96HC4 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
PDLIM5Q96HC4 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
PDLIM5Q96HC4 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC16.33■□□□□ 0.21
PDLIM5Q96HC4 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
PDLIM5Q96HC4 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC16.33■□□□□ 0.21
PDLIM5Q96HC4 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC16.33■□□□□ 0.21
PDLIM5Q96HC4 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
PDLIM5Q96HC4 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.33■□□□□ 0.2
PDLIM5Q96HC4 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PDLIM5Q96HC4 AL391005.1-201ENST00000623953 2435 ntBASIC16.33■□□□□ 0.2
PDLIM5Q96HC4 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
PDLIM5Q96HC4 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
PDLIM5Q96HC4 HMGA1P7-201ENST00000406908 502 ntBASIC16.33■□□□□ 0.2
PDLIM5Q96HC4 RNA5SP415-201ENST00000517246 115 ntBASIC16.33■□□□□ 0.2
PDLIM5Q96HC4 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PDLIM5Q96HC4 AL031432.2-201ENST00000566714 459 ntBASIC16.33■□□□□ 0.2
PDLIM5Q96HC4 AL928711.1-201ENST00000570165 459 ntBASIC16.33■□□□□ 0.2
PDLIM5Q96HC4 RPS15-207ENST00000591032 550 ntTSL 3 BASIC16.33■□□□□ 0.2
PDLIM5Q96HC4 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PDLIM5Q96HC4 RPS15-212ENST00000593052 629 ntTSL 2 BASIC16.33■□□□□ 0.2
PDLIM5Q96HC4 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC16.33■□□□□ 0.2
PDLIM5Q96HC4 HLA-A-201ENST00000376802 1334 ntBASIC16.33■□□□□ 0.2
PDLIM5Q96HC4 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC16.33■□□□□ 0.2
PDLIM5Q96HC4 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC16.33■□□□□ 0.2
PDLIM5Q96HC4 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
PDLIM5Q96HC4 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PDLIM5Q96HC4 HARS-203ENST00000431330 1774 ntTSL 2 BASIC16.33■□□□□ 0.2
PDLIM5Q96HC4 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC16.33■□□□□ 0.2
PDLIM5Q96HC4 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.33■□□□□ 0.2
PDLIM5Q96HC4 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PDLIM5Q96HC4 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC16.33■□□□□ 0.2
PDLIM5Q96HC4 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC16.33■□□□□ 0.2
PDLIM5Q96HC4 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.33■□□□□ 0.2
PDLIM5Q96HC4 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PDLIM5Q96HC4 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
PDLIM5Q96HC4 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
PDLIM5Q96HC4 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
PDLIM5Q96HC4 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
PDLIM5Q96HC4 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PDLIM5Q96HC4 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PDLIM5Q96HC4 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PDLIM5Q96HC4 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
PDLIM5Q96HC4 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC16.32■□□□□ 0.2
PDLIM5Q96HC4 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
PDLIM5Q96HC4 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PDLIM5Q96HC4 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
PDLIM5Q96HC4 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC16.32■□□□□ 0.2
PDLIM5Q96HC4 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PDLIM5Q96HC4 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC16.32■□□□□ 0.2
PDLIM5Q96HC4 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
PDLIM5Q96HC4 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC16.32■□□□□ 0.2
PDLIM5Q96HC4 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PDLIM5Q96HC4 CRYGEP-201ENST00000412192 528 ntBASIC16.32■□□□□ 0.2
PDLIM5Q96HC4 PMS2P4-201ENST00000412466 1052 ntBASIC16.32■□□□□ 0.2
PDLIM5Q96HC4 IGLL3P-201ENST00000412472 434 ntBASIC16.32■□□□□ 0.2
PDLIM5Q96HC4 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
PDLIM5Q96HC4 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
PDLIM5Q96HC4 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PDLIM5Q96HC4 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC16.32■□□□□ 0.2
PDLIM5Q96HC4 RHOQP3-201ENST00000437982 621 ntBASIC16.32■□□□□ 0.2
PDLIM5Q96HC4 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC16.32■□□□□ 0.2
PDLIM5Q96HC4 HCG4B-203ENST00000450128 991 ntBASIC16.32■□□□□ 0.2
PDLIM5Q96HC4 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
PDLIM5Q96HC4 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC16.32■□□□□ 0.2
PDLIM5Q96HC4 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC16.32■□□□□ 0.2
PDLIM5Q96HC4 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC16.32■□□□□ 0.2
PDLIM5Q96HC4 AC079776.4-201ENST00000511039 504 ntBASIC16.32■□□□□ 0.2
PDLIM5Q96HC4 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC16.32■□□□□ 0.2
PDLIM5Q96HC4 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
PDLIM5Q96HC4 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
PDLIM5Q96HC4 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
PDLIM5Q96HC4 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.32■□□□□ 0.2
PDLIM5Q96HC4 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PDLIM5Q96HC4 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC16.32■□□□□ 0.2
PDLIM5Q96HC4 MIR4751-201ENST00000578027 74 ntBASIC16.32■□□□□ 0.2
PDLIM5Q96HC4 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PDLIM5Q96HC4 AL662844.4-201ENST00000606367 2838 ntBASIC16.32■□□□□ 0.2
PDLIM5Q96HC4 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC16.32■□□□□ 0.2
PDLIM5Q96HC4 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC16.32■□□□□ 0.2
PDLIM5Q96HC4 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC16.32■□□□□ 0.2
PDLIM5Q96HC4 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC16.32■□□□□ 0.2
PDLIM5Q96HC4 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC16.32■□□□□ 0.2
PDLIM5Q96HC4 AC011270.2-201ENST00000624293 2550 ntBASIC16.32■□□□□ 0.2
PDLIM5Q96HC4 AC005052.1-201ENST00000625181 2492 ntBASIC16.32■□□□□ 0.2
PDLIM5Q96HC4 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC16.32■□□□□ 0.2
PDLIM5Q96HC4 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PDLIM5Q96HC4 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PDLIM5Q96HC4 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PDLIM5Q96HC4 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
PDLIM5Q96HC4 AC092364.2-201ENST00000596710 2692 ntBASIC16.32■□□□□ 0.2
PDLIM5Q96HC4 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PDLIM5Q96HC4 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
PDLIM5Q96HC4 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PDLIM5Q96HC4 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PDLIM5Q96HC4 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
PDLIM5Q96HC4 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
PDLIM5Q96HC4 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 63.4 ms