Protein–RNA interactions for Protein: Q96A23

CPNE4, Copine-4, humanhuman

Predicted RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4Q96A23 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC15.04■□□□□ -0
CPNE4Q96A23 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC15.04■□□□□ -0
CPNE4Q96A23 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC15.04■□□□□ -0
CPNE4Q96A23 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CPNE4Q96A23 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
CPNE4Q96A23 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
CPNE4Q96A23 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC15.04■□□□□ -0
CPNE4Q96A23 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CPNE4Q96A23 HARS-204ENST00000438307 1789 ntTSL 2 BASIC15.04■□□□□ -0
CPNE4Q96A23 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
CPNE4Q96A23 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC15.04■□□□□ -0
CPNE4Q96A23 AC006277.1-201ENST00000624348 1610 ntBASIC15.04■□□□□ -0
CPNE4Q96A23 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC15.04■□□□□ -0
CPNE4Q96A23 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC15.04■□□□□ -0
CPNE4Q96A23 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC15.04■□□□□ -0
CPNE4Q96A23 KRT18P13-201ENST00000400056 1290 ntBASIC15.04■□□□□ -0
CPNE4Q96A23 CDK2AP2P3-201ENST00000422476 372 ntBASIC15.04■□□□□ -0
CPNE4Q96A23 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC15.04■□□□□ -0
CPNE4Q96A23 MIR4492-201ENST00000581627 80 ntBASIC15.04■□□□□ -0
CPNE4Q96A23 AC023511.2-201ENST00000618803 211 ntBASIC15.04■□□□□ -0
CPNE4Q96A23 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
CPNE4Q96A23 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC15.04■□□□□ -0
CPNE4Q96A23 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CPNE4Q96A23 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC15.04■□□□□ -0
CPNE4Q96A23 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC15.04■□□□□ -0
CPNE4Q96A23 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CPNE4Q96A23 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
CPNE4Q96A23 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CPNE4Q96A23 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC15.04■□□□□ -0
CPNE4Q96A23 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC15.04■□□□□ -0
CPNE4Q96A23 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
CPNE4Q96A23 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
CPNE4Q96A23 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CPNE4Q96A23 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CPNE4Q96A23 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
CPNE4Q96A23 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
CPNE4Q96A23 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CPNE4Q96A23 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
CPNE4Q96A23 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC15.03■□□□□ -0
CPNE4Q96A23 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC15.03■□□□□ -0
CPNE4Q96A23 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC15.03■□□□□ -0
CPNE4Q96A23 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
CPNE4Q96A23 PCDHA12-202ENST00000613593 2588 ntBASIC15.03■□□□□ -0
CPNE4Q96A23 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
CPNE4Q96A23 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC15.03■□□□□ -0
CPNE4Q96A23 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CPNE4Q96A23 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
CPNE4Q96A23 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CPNE4Q96A23 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
CPNE4Q96A23 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
CPNE4Q96A23 NEK7-201ENST00000367383 586 ntTSL 2 BASIC15.03■□□□□ -0
CPNE4Q96A23 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
CPNE4Q96A23 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC15.03■□□□□ -0
CPNE4Q96A23 HMGA1P7-201ENST00000406908 502 ntBASIC15.03■□□□□ -0
CPNE4Q96A23 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC15.03■□□□□ -0
CPNE4Q96A23 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC15.03■□□□□ -0
CPNE4Q96A23 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
CPNE4Q96A23 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC15.03■□□□□ -0
CPNE4Q96A23 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC15.03■□□□□ -0
CPNE4Q96A23 THTPA-204ENST00000554970 569 ntTSL 4 BASIC15.03■□□□□ -0
CPNE4Q96A23 THTPA-206ENST00000556015 535 ntTSL 3 BASIC15.03■□□□□ -0
CPNE4Q96A23 MIR3909-201ENST00000579518 119 ntBASIC15.03■□□□□ -0
CPNE4Q96A23 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC15.03■□□□□ -0
CPNE4Q96A23 CYP2A7P1-201ENST00000595391 815 ntBASIC15.03■□□□□ -0
CPNE4Q96A23 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC15.03■□□□□ -0
CPNE4Q96A23 HOTTIP_1.1-201ENST00000620415 57 ntBASIC15.03■□□□□ -0
CPNE4Q96A23 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC15.03■□□□□ -0
CPNE4Q96A23 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
CPNE4Q96A23 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CPNE4Q96A23 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC15.03■□□□□ -0
CPNE4Q96A23 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CPNE4Q96A23 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CPNE4Q96A23 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CPNE4Q96A23 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC15.03■□□□□ -0
CPNE4Q96A23 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CPNE4Q96A23 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC15.03■□□□□ -0
CPNE4Q96A23 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CPNE4Q96A23 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC15.03■□□□□ -0
CPNE4Q96A23 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CPNE4Q96A23 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
CPNE4Q96A23 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
CPNE4Q96A23 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC15.03■□□□□ -0
CPNE4Q96A23 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC15.02■□□□□ -0
CPNE4Q96A23 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC15.02■□□□□ -0
CPNE4Q96A23 PKD1P5-201ENST00000532415 10291 ntBASIC15.02■□□□□ -0
CPNE4Q96A23 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC15.02■□□□□ -0
CPNE4Q96A23 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
CPNE4Q96A23 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CPNE4Q96A23 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC15.02■□□□□ -0
CPNE4Q96A23 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC15.02■□□□□ -0
CPNE4Q96A23 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC15.02■□□□□ -0
CPNE4Q96A23 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CPNE4Q96A23 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC15.02■□□□□ -0
CPNE4Q96A23 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC15.02■□□□□ -0
CPNE4Q96A23 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC15.02■□□□□ -0
CPNE4Q96A23 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC15.02■□□□□ -0
CPNE4Q96A23 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
CPNE4Q96A23 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
CPNE4Q96A23 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC15.02■□□□□ -0
CPNE4Q96A23 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC15.02■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms