Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RAPGEF4Q8WZA2 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC21.77■■□□□ 1.08
RAPGEF4Q8WZA2 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
RAPGEF4Q8WZA2 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC21.77■■□□□ 1.08
RAPGEF4Q8WZA2 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RAPGEF4Q8WZA2 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
RAPGEF4Q8WZA2 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RAPGEF4Q8WZA2 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC21.76■■□□□ 1.07
RAPGEF4Q8WZA2 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RAPGEF4Q8WZA2 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
RAPGEF4Q8WZA2 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RAPGEF4Q8WZA2 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC21.76■■□□□ 1.07
RAPGEF4Q8WZA2 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
RAPGEF4Q8WZA2 RPS19-201ENST00000221975 500 ntTSL 3 BASIC21.76■■□□□ 1.07
RAPGEF4Q8WZA2 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RAPGEF4Q8WZA2 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
RAPGEF4Q8WZA2 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RAPGEF4Q8WZA2 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RAPGEF4Q8WZA2 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
RAPGEF4Q8WZA2 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
RAPGEF4Q8WZA2 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RAPGEF4Q8WZA2 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RAPGEF4Q8WZA2 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
RAPGEF4Q8WZA2 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RAPGEF4Q8WZA2 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
RAPGEF4Q8WZA2 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RAPGEF4Q8WZA2 AL353779.1-201ENST00000434793 351 ntBASIC21.76■■□□□ 1.07
RAPGEF4Q8WZA2 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC21.76■■□□□ 1.07
RAPGEF4Q8WZA2 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC21.76■■□□□ 1.07
RAPGEF4Q8WZA2 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC21.76■■□□□ 1.07
RAPGEF4Q8WZA2 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC21.76■■□□□ 1.07
RAPGEF4Q8WZA2 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RAPGEF4Q8WZA2 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RAPGEF4Q8WZA2 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
RAPGEF4Q8WZA2 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC21.76■■□□□ 1.07
RAPGEF4Q8WZA2 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
RAPGEF4Q8WZA2 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
RAPGEF4Q8WZA2 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
RAPGEF4Q8WZA2 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
RAPGEF4Q8WZA2 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC21.75■■□□□ 1.07
RAPGEF4Q8WZA2 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC21.75■■□□□ 1.07
RAPGEF4Q8WZA2 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
RAPGEF4Q8WZA2 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
RAPGEF4Q8WZA2 API5-211ENST00000534695 560 ntTSL 5 BASIC21.75■■□□□ 1.07
RAPGEF4Q8WZA2 AC135586.1-201ENST00000539323 574 ntBASIC21.75■■□□□ 1.07
RAPGEF4Q8WZA2 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC21.75■■□□□ 1.07
RAPGEF4Q8WZA2 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC21.75■■□□□ 1.07
RAPGEF4Q8WZA2 AC140912.1-201ENST00000577171 1054 ntBASIC21.75■■□□□ 1.07
RAPGEF4Q8WZA2 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC21.75■■□□□ 1.07
RAPGEF4Q8WZA2 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC21.75■■□□□ 1.07
RAPGEF4Q8WZA2 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
RAPGEF4Q8WZA2 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RAPGEF4Q8WZA2 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC21.75■■□□□ 1.07
RAPGEF4Q8WZA2 AC092068.3-201ENST00000587894 2016 ntBASIC21.75■■□□□ 1.07
RAPGEF4Q8WZA2 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
RAPGEF4Q8WZA2 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RAPGEF4Q8WZA2 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC21.75■■□□□ 1.07
RAPGEF4Q8WZA2 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC21.75■■□□□ 1.07
RAPGEF4Q8WZA2 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC21.75■■□□□ 1.07
RAPGEF4Q8WZA2 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
RAPGEF4Q8WZA2 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC21.75■■□□□ 1.07
RAPGEF4Q8WZA2 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
RAPGEF4Q8WZA2 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
RAPGEF4Q8WZA2 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC21.74■■□□□ 1.07
RAPGEF4Q8WZA2 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RAPGEF4Q8WZA2 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC21.74■■□□□ 1.07
RAPGEF4Q8WZA2 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RAPGEF4Q8WZA2 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
RAPGEF4Q8WZA2 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
RAPGEF4Q8WZA2 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RAPGEF4Q8WZA2 PTPA-220ENST00000436883 532 ntTSL 4 BASIC21.74■■□□□ 1.07
RAPGEF4Q8WZA2 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC21.74■■□□□ 1.07
RAPGEF4Q8WZA2 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RAPGEF4Q8WZA2 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC21.74■■□□□ 1.07
RAPGEF4Q8WZA2 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
RAPGEF4Q8WZA2 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
RAPGEF4Q8WZA2 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RAPGEF4Q8WZA2 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC21.74■■□□□ 1.07
RAPGEF4Q8WZA2 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RAPGEF4Q8WZA2 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC21.74■■□□□ 1.07
RAPGEF4Q8WZA2 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RAPGEF4Q8WZA2 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
RAPGEF4Q8WZA2 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
RAPGEF4Q8WZA2 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC21.73■■□□□ 1.07
RAPGEF4Q8WZA2 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RAPGEF4Q8WZA2 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
RAPGEF4Q8WZA2 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
RAPGEF4Q8WZA2 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RAPGEF4Q8WZA2 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC21.73■■□□□ 1.07
RAPGEF4Q8WZA2 BTBD7P1-201ENST00000447253 1453 ntBASIC21.73■■□□□ 1.07
RAPGEF4Q8WZA2 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC21.73■■□□□ 1.07
RAPGEF4Q8WZA2 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
RAPGEF4Q8WZA2 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC21.73■■□□□ 1.07
RAPGEF4Q8WZA2 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC21.73■■□□□ 1.07
RAPGEF4Q8WZA2 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC21.73■■□□□ 1.07
RAPGEF4Q8WZA2 ZNF890P-202ENST00000530367 1156 ntBASIC21.73■■□□□ 1.07
RAPGEF4Q8WZA2 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
RAPGEF4Q8WZA2 NOP2-220ENST00000545915 630 ntTSL 2 BASIC21.73■■□□□ 1.07
RAPGEF4Q8WZA2 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC21.73■■□□□ 1.07
RAPGEF4Q8WZA2 AL359881.2-201ENST00000602973 570 ntBASIC21.73■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms