Protein–RNA interactions for Protein: Q8NEP7

KLHDC9, Kelch domain-containing protein 9, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC9Q8NEP7 RAB43P1-201ENST00000561790 589 ntBASIC18.25■□□□□ 0.51
KLHDC9Q8NEP7 NAA38-206ENST00000576384 424 ntTSL 2 BASIC18.25■□□□□ 0.51
KLHDC9Q8NEP7 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
KLHDC9Q8NEP7 AL139011.1-202ENST00000642063 584 ntBASIC18.25■□□□□ 0.51
KLHDC9Q8NEP7 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC18.25■□□□□ 0.51
KLHDC9Q8NEP7 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
KLHDC9Q8NEP7 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
KLHDC9Q8NEP7 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC18.25■□□□□ 0.51
KLHDC9Q8NEP7 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
KLHDC9Q8NEP7 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
KLHDC9Q8NEP7 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
KLHDC9Q8NEP7 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
KLHDC9Q8NEP7 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
KLHDC9Q8NEP7 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
KLHDC9Q8NEP7 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
KLHDC9Q8NEP7 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC18.24■□□□□ 0.51
KLHDC9Q8NEP7 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
KLHDC9Q8NEP7 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
KLHDC9Q8NEP7 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
KLHDC9Q8NEP7 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
KLHDC9Q8NEP7 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
KLHDC9Q8NEP7 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC18.24■□□□□ 0.51
KLHDC9Q8NEP7 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.24■□□□□ 0.51
KLHDC9Q8NEP7 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
KLHDC9Q8NEP7 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC18.24■□□□□ 0.51
KLHDC9Q8NEP7 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
KLHDC9Q8NEP7 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
KLHDC9Q8NEP7 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
KLHDC9Q8NEP7 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
KLHDC9Q8NEP7 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC18.24■□□□□ 0.51
KLHDC9Q8NEP7 MEP1AP4-201ENST00000423244 1087 ntBASIC18.24■□□□□ 0.51
KLHDC9Q8NEP7 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
KLHDC9Q8NEP7 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC18.24■□□□□ 0.51
KLHDC9Q8NEP7 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
KLHDC9Q8NEP7 FTH1-202ENST00000526640 786 ntTSL 2 BASIC18.24■□□□□ 0.51
KLHDC9Q8NEP7 TPRX2P-201ENST00000535362 881 ntBASIC18.24■□□□□ 0.51
KLHDC9Q8NEP7 AC023310.3-201ENST00000557027 670 ntBASIC18.24■□□□□ 0.51
KLHDC9Q8NEP7 AC100756.1-201ENST00000562736 682 ntBASIC18.24■□□□□ 0.51
KLHDC9Q8NEP7 AC138749.3-201ENST00000567691 622 ntBASIC18.24■□□□□ 0.51
KLHDC9Q8NEP7 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC18.24■□□□□ 0.51
KLHDC9Q8NEP7 CTBP2P3-201ENST00000585629 1255 ntBASIC18.24■□□□□ 0.51
KLHDC9Q8NEP7 AC116165.1-201ENST00000611806 668 ntBASIC18.24■□□□□ 0.51
KLHDC9Q8NEP7 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC18.24■□□□□ 0.51
KLHDC9Q8NEP7 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
KLHDC9Q8NEP7 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC18.24■□□□□ 0.51
KLHDC9Q8NEP7 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
KLHDC9Q8NEP7 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
KLHDC9Q8NEP7 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
KLHDC9Q8NEP7 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC18.23■□□□□ 0.51
KLHDC9Q8NEP7 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
KLHDC9Q8NEP7 NOC2LP1-202ENST00000452600 2235 ntBASIC18.23■□□□□ 0.51
KLHDC9Q8NEP7 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC18.23■□□□□ 0.51
KLHDC9Q8NEP7 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
KLHDC9Q8NEP7 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
KLHDC9Q8NEP7 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC18.23■□□□□ 0.51
KLHDC9Q8NEP7 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
KLHDC9Q8NEP7 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
KLHDC9Q8NEP7 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
KLHDC9Q8NEP7 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
KLHDC9Q8NEP7 MIR658-201ENST00000385210 100 ntBASIC18.23■□□□□ 0.51
KLHDC9Q8NEP7 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
KLHDC9Q8NEP7 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
KLHDC9Q8NEP7 MYCLP2-201ENST00000449268 967 ntBASIC18.23■□□□□ 0.51
KLHDC9Q8NEP7 AL589987.1-201ENST00000453380 819 ntBASIC18.23■□□□□ 0.51
KLHDC9Q8NEP7 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
KLHDC9Q8NEP7 ELK1P1-201ENST00000485699 580 ntBASIC18.23■□□□□ 0.51
KLHDC9Q8NEP7 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC18.23■□□□□ 0.51
KLHDC9Q8NEP7 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC18.23■□□□□ 0.51
KLHDC9Q8NEP7 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC18.23■□□□□ 0.51
KLHDC9Q8NEP7 AC026979.3-201ENST00000607315 403 ntBASIC18.23■□□□□ 0.51
KLHDC9Q8NEP7 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC18.23■□□□□ 0.51
KLHDC9Q8NEP7 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
KLHDC9Q8NEP7 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.23■□□□□ 0.51
KLHDC9Q8NEP7 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC18.23■□□□□ 0.51
KLHDC9Q8NEP7 AC134043.2-201ENST00000624206 2238 ntBASIC18.23■□□□□ 0.51
KLHDC9Q8NEP7 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
KLHDC9Q8NEP7 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
KLHDC9Q8NEP7 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
KLHDC9Q8NEP7 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
KLHDC9Q8NEP7 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
KLHDC9Q8NEP7 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
KLHDC9Q8NEP7 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
KLHDC9Q8NEP7 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
KLHDC9Q8NEP7 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC18.22■□□□□ 0.51
KLHDC9Q8NEP7 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC18.22■□□□□ 0.51
KLHDC9Q8NEP7 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC18.22■□□□□ 0.51
KLHDC9Q8NEP7 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
KLHDC9Q8NEP7 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
KLHDC9Q8NEP7 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
KLHDC9Q8NEP7 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
KLHDC9Q8NEP7 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
KLHDC9Q8NEP7 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC18.22■□□□□ 0.51
KLHDC9Q8NEP7 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
KLHDC9Q8NEP7 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC18.22■□□□□ 0.51
KLHDC9Q8NEP7 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC18.22■□□□□ 0.51
KLHDC9Q8NEP7 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
KLHDC9Q8NEP7 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC18.22■□□□□ 0.51
KLHDC9Q8NEP7 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
KLHDC9Q8NEP7 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
KLHDC9Q8NEP7 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms