Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
ARHGEF39Q8N4T4 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
ARHGEF39Q8N4T4 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
ARHGEF39Q8N4T4 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
ARHGEF39Q8N4T4 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
ARHGEF39Q8N4T4 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
ARHGEF39Q8N4T4 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC15.75■□□□□ 0.11
ARHGEF39Q8N4T4 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
ARHGEF39Q8N4T4 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
ARHGEF39Q8N4T4 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
ARHGEF39Q8N4T4 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
ARHGEF39Q8N4T4 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
ARHGEF39Q8N4T4 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
ARHGEF39Q8N4T4 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
ARHGEF39Q8N4T4 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
ARHGEF39Q8N4T4 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC15.74■□□□□ 0.11
ARHGEF39Q8N4T4 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC15.74■□□□□ 0.11
ARHGEF39Q8N4T4 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC15.74■□□□□ 0.11
ARHGEF39Q8N4T4 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ARHGEF39Q8N4T4 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC15.74■□□□□ 0.11
ARHGEF39Q8N4T4 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
ARHGEF39Q8N4T4 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
ARHGEF39Q8N4T4 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
ARHGEF39Q8N4T4 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC15.74■□□□□ 0.11
ARHGEF39Q8N4T4 RPS8P6-201ENST00000426177 609 ntBASIC15.74■□□□□ 0.11
ARHGEF39Q8N4T4 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC15.74■□□□□ 0.11
ARHGEF39Q8N4T4 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC15.74■□□□□ 0.11
ARHGEF39Q8N4T4 TIMM8BP1-201ENST00000452384 211 ntBASIC15.74■□□□□ 0.11
ARHGEF39Q8N4T4 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC15.74■□□□□ 0.11
ARHGEF39Q8N4T4 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC15.74■□□□□ 0.11
ARHGEF39Q8N4T4 AC092183.1-201ENST00000469884 875 ntBASIC15.74■□□□□ 0.11
ARHGEF39Q8N4T4 AC069335.1-201ENST00000489972 472 ntBASIC15.74■□□□□ 0.11
ARHGEF39Q8N4T4 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
ARHGEF39Q8N4T4 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC15.74■□□□□ 0.11
ARHGEF39Q8N4T4 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC15.74■□□□□ 0.11
ARHGEF39Q8N4T4 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC15.74■□□□□ 0.11
ARHGEF39Q8N4T4 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC15.74■□□□□ 0.11
ARHGEF39Q8N4T4 AL596442.2-201ENST00000610240 980 ntBASIC15.74■□□□□ 0.11
ARHGEF39Q8N4T4 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
ARHGEF39Q8N4T4 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
ARHGEF39Q8N4T4 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
ARHGEF39Q8N4T4 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ARHGEF39Q8N4T4 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC15.74■□□□□ 0.11
ARHGEF39Q8N4T4 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC15.74■□□□□ 0.11
ARHGEF39Q8N4T4 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
ARHGEF39Q8N4T4 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
ARHGEF39Q8N4T4 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC15.74■□□□□ 0.11
ARHGEF39Q8N4T4 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ARHGEF39Q8N4T4 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
ARHGEF39Q8N4T4 AD000864.1-201ENST00000624076 2295 ntBASIC15.74■□□□□ 0.11
ARHGEF39Q8N4T4 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
ARHGEF39Q8N4T4 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
ARHGEF39Q8N4T4 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC15.73■□□□□ 0.11
ARHGEF39Q8N4T4 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
ARHGEF39Q8N4T4 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ARHGEF39Q8N4T4 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ARHGEF39Q8N4T4 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
ARHGEF39Q8N4T4 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
ARHGEF39Q8N4T4 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC15.73■□□□□ 0.11
ARHGEF39Q8N4T4 FLJ38576-201ENST00000623820 2459 ntBASIC15.73■□□□□ 0.11
ARHGEF39Q8N4T4 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
ARHGEF39Q8N4T4 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC15.73■□□□□ 0.11
ARHGEF39Q8N4T4 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
ARHGEF39Q8N4T4 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
ARHGEF39Q8N4T4 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ARHGEF39Q8N4T4 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ARHGEF39Q8N4T4 GPAA1P2-202ENST00000606848 1787 ntBASIC15.73■□□□□ 0.11
ARHGEF39Q8N4T4 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
ARHGEF39Q8N4T4 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ARHGEF39Q8N4T4 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ARHGEF39Q8N4T4 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ARHGEF39Q8N4T4 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC15.73■□□□□ 0.11
ARHGEF39Q8N4T4 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC15.73■□□□□ 0.11
ARHGEF39Q8N4T4 SPDYE11-202ENST00000450699 704 ntBASIC15.73■□□□□ 0.11
ARHGEF39Q8N4T4 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC15.73■□□□□ 0.11
ARHGEF39Q8N4T4 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
ARHGEF39Q8N4T4 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC15.73■□□□□ 0.11
ARHGEF39Q8N4T4 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC15.73■□□□□ 0.11
ARHGEF39Q8N4T4 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC15.73■□□□□ 0.11
ARHGEF39Q8N4T4 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC15.73■□□□□ 0.11
ARHGEF39Q8N4T4 RNF34-208ENST00000555076 593 ntTSL 3 BASIC15.73■□□□□ 0.11
ARHGEF39Q8N4T4 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
ARHGEF39Q8N4T4 AL138918.1-201ENST00000568306 659 ntBASIC15.73■□□□□ 0.11
ARHGEF39Q8N4T4 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC15.73■□□□□ 0.11
ARHGEF39Q8N4T4 SPDYE9P-201ENST00000570642 692 ntBASIC15.73■□□□□ 0.11
ARHGEF39Q8N4T4 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC15.73■□□□□ 0.11
ARHGEF39Q8N4T4 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC15.73■□□□□ 0.11
ARHGEF39Q8N4T4 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
ARHGEF39Q8N4T4 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
ARHGEF39Q8N4T4 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC15.73■□□□□ 0.11
ARHGEF39Q8N4T4 AC073389.1-201ENST00000595595 795 ntBASIC15.73■□□□□ 0.11
ARHGEF39Q8N4T4 AC004835.2-201ENST00000603762 682 ntBASIC15.73■□□□□ 0.11
ARHGEF39Q8N4T4 SPDYE10P-202ENST00000612005 668 ntBASIC15.73■□□□□ 0.11
ARHGEF39Q8N4T4 SPDYE8P-202ENST00000612377 668 ntBASIC15.73■□□□□ 0.11
ARHGEF39Q8N4T4 AC079781.4-201ENST00000641908 219 ntBASIC15.73■□□□□ 0.11
ARHGEF39Q8N4T4 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ARHGEF39Q8N4T4 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
ARHGEF39Q8N4T4 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ARHGEF39Q8N4T4 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
ARHGEF39Q8N4T4 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms