Protein–RNA interactions for Protein: Q8N3S3

PHTF2, Putative homeodomain transcription factor 2, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2Q8N3S3 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
PHTF2Q8N3S3 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PHTF2Q8N3S3 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PHTF2Q8N3S3 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PHTF2Q8N3S3 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
PHTF2Q8N3S3 MIR770-201ENST00000390219 98 ntBASIC17.29■□□□□ 0.36
PHTF2Q8N3S3 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PHTF2Q8N3S3 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC17.29■□□□□ 0.36
PHTF2Q8N3S3 AC079140.1-201ENST00000508039 487 ntBASIC17.29■□□□□ 0.36
PHTF2Q8N3S3 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC17.29■□□□□ 0.36
PHTF2Q8N3S3 DUX4L17-201ENST00000557360 1267 ntBASIC17.29■□□□□ 0.36
PHTF2Q8N3S3 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
PHTF2Q8N3S3 AC004449.1-201ENST00000564240 433 ntBASIC17.29■□□□□ 0.36
PHTF2Q8N3S3 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC17.29■□□□□ 0.36
PHTF2Q8N3S3 LINC00628-201ENST00000628516 1289 ntBASIC17.29■□□□□ 0.36
PHTF2Q8N3S3 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PHTF2Q8N3S3 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PHTF2Q8N3S3 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PHTF2Q8N3S3 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PHTF2Q8N3S3 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
PHTF2Q8N3S3 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC17.29■□□□□ 0.36
PHTF2Q8N3S3 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PHTF2Q8N3S3 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PHTF2Q8N3S3 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
PHTF2Q8N3S3 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
PHTF2Q8N3S3 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PHTF2Q8N3S3 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PHTF2Q8N3S3 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PHTF2Q8N3S3 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PHTF2Q8N3S3 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PHTF2Q8N3S3 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC17.28■□□□□ 0.36
PHTF2Q8N3S3 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
PHTF2Q8N3S3 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PHTF2Q8N3S3 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PHTF2Q8N3S3 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
PHTF2Q8N3S3 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PHTF2Q8N3S3 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PHTF2Q8N3S3 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PHTF2Q8N3S3 TFAMP1-201ENST00000412727 736 ntBASIC17.28■□□□□ 0.36
PHTF2Q8N3S3 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PHTF2Q8N3S3 SPDYE11-202ENST00000450699 704 ntBASIC17.28■□□□□ 0.36
PHTF2Q8N3S3 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC17.28■□□□□ 0.36
PHTF2Q8N3S3 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC17.28■□□□□ 0.36
PHTF2Q8N3S3 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC17.28■□□□□ 0.36
PHTF2Q8N3S3 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC17.28■□□□□ 0.36
PHTF2Q8N3S3 AL135744.1-201ENST00000565098 629 ntBASIC17.28■□□□□ 0.36
PHTF2Q8N3S3 SPDYE9P-201ENST00000570642 692 ntBASIC17.28■□□□□ 0.36
PHTF2Q8N3S3 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC17.28■□□□□ 0.36
PHTF2Q8N3S3 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PHTF2Q8N3S3 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PHTF2Q8N3S3 SPDYE10P-202ENST00000612005 668 ntBASIC17.28■□□□□ 0.36
PHTF2Q8N3S3 SPDYE8P-202ENST00000612377 668 ntBASIC17.28■□□□□ 0.36
PHTF2Q8N3S3 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC17.28■□□□□ 0.36
PHTF2Q8N3S3 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC17.28■□□□□ 0.36
PHTF2Q8N3S3 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PHTF2Q8N3S3 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PHTF2Q8N3S3 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PHTF2Q8N3S3 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PHTF2Q8N3S3 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PHTF2Q8N3S3 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PHTF2Q8N3S3 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PHTF2Q8N3S3 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PHTF2Q8N3S3 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PHTF2Q8N3S3 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
PHTF2Q8N3S3 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC17.28■□□□□ 0.36
PHTF2Q8N3S3 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PHTF2Q8N3S3 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC17.28■□□□□ 0.36
PHTF2Q8N3S3 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PHTF2Q8N3S3 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PHTF2Q8N3S3 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
PHTF2Q8N3S3 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
PHTF2Q8N3S3 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
PHTF2Q8N3S3 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
PHTF2Q8N3S3 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC17.27■□□□□ 0.36
PHTF2Q8N3S3 AC012569.1-201ENST00000591191 1524 ntBASIC17.27■□□□□ 0.36
PHTF2Q8N3S3 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC17.27■□□□□ 0.36
PHTF2Q8N3S3 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PHTF2Q8N3S3 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC17.27■□□□□ 0.36
PHTF2Q8N3S3 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PHTF2Q8N3S3 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC17.27■□□□□ 0.36
PHTF2Q8N3S3 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PHTF2Q8N3S3 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC17.27■□□□□ 0.36
PHTF2Q8N3S3 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
PHTF2Q8N3S3 AC060834.1-201ENST00000443027 2032 ntBASIC17.27■□□□□ 0.36
PHTF2Q8N3S3 AC046158.3-201ENST00000624947 2558 ntBASIC17.27■□□□□ 0.36
PHTF2Q8N3S3 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PHTF2Q8N3S3 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PHTF2Q8N3S3 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PHTF2Q8N3S3 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC17.27■□□□□ 0.36
PHTF2Q8N3S3 RN7SL589P-201ENST00000481268 310 ntBASIC17.27■□□□□ 0.36
PHTF2Q8N3S3 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC17.27■□□□□ 0.36
PHTF2Q8N3S3 RARRES2P8-201ENST00000566335 367 ntBASIC17.27■□□□□ 0.36
PHTF2Q8N3S3 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC17.27■□□□□ 0.36
PHTF2Q8N3S3 AC015911.4-201ENST00000588022 1070 ntBASIC17.27■□□□□ 0.36
PHTF2Q8N3S3 AL009183.1-201ENST00000603760 355 ntBASIC17.27■□□□□ 0.36
PHTF2Q8N3S3 AC093512.1-201ENST00000617969 520 ntBASIC17.27■□□□□ 0.36
PHTF2Q8N3S3 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PHTF2Q8N3S3 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.27■□□□□ 0.36
PHTF2Q8N3S3 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC17.27■□□□□ 0.35
PHTF2Q8N3S3 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms