Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
LINC01561Q8N1V8 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
LINC01561Q8N1V8 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LINC01561Q8N1V8 AC079776.2-201ENST00000641154 1609 ntBASIC11.28□□□□□ -0.6
LINC01561Q8N1V8 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LINC01561Q8N1V8 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC11.28□□□□□ -0.6
LINC01561Q8N1V8 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LINC01561Q8N1V8 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LINC01561Q8N1V8 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LINC01561Q8N1V8 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LINC01561Q8N1V8 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC11.28□□□□□ -0.6
LINC01561Q8N1V8 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LINC01561Q8N1V8 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
LINC01561Q8N1V8 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC11.28□□□□□ -0.6
LINC01561Q8N1V8 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC11.28□□□□□ -0.6
LINC01561Q8N1V8 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LINC01561Q8N1V8 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LINC01561Q8N1V8 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LINC01561Q8N1V8 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LINC01561Q8N1V8 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
LINC01561Q8N1V8 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
LINC01561Q8N1V8 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC11.28□□□□□ -0.6
LINC01561Q8N1V8 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LINC01561Q8N1V8 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC11.28□□□□□ -0.6
LINC01561Q8N1V8 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC11.28□□□□□ -0.6
LINC01561Q8N1V8 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC11.28□□□□□ -0.6
LINC01561Q8N1V8 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
LINC01561Q8N1V8 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC11.28□□□□□ -0.6
LINC01561Q8N1V8 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
LINC01561Q8N1V8 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
LINC01561Q8N1V8 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LINC01561Q8N1V8 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LINC01561Q8N1V8 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LINC01561Q8N1V8 LINC01144-201ENST00000626198 1710 ntBASIC11.28□□□□□ -0.6
LINC01561Q8N1V8 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LINC01561Q8N1V8 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LINC01561Q8N1V8 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC11.28□□□□□ -0.6
LINC01561Q8N1V8 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC11.28□□□□□ -0.6
LINC01561Q8N1V8 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
LINC01561Q8N1V8 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
LINC01561Q8N1V8 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LINC01561Q8N1V8 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LINC01561Q8N1V8 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC11.28□□□□□ -0.6
LINC01561Q8N1V8 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC11.28□□□□□ -0.6
LINC01561Q8N1V8 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LINC01561Q8N1V8 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
LINC01561Q8N1V8 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC11.28□□□□□ -0.6
LINC01561Q8N1V8 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
LINC01561Q8N1V8 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
LINC01561Q8N1V8 AC148477.5-201ENST00000625164 1645 ntBASIC11.27□□□□□ -0.6
LINC01561Q8N1V8 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
LINC01561Q8N1V8 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
LINC01561Q8N1V8 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
LINC01561Q8N1V8 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.6
LINC01561Q8N1V8 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC11.27□□□□□ -0.6
LINC01561Q8N1V8 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC11.27□□□□□ -0.6
LINC01561Q8N1V8 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
LINC01561Q8N1V8 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
LINC01561Q8N1V8 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC11.27□□□□□ -0.61
LINC01561Q8N1V8 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
LINC01561Q8N1V8 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
LINC01561Q8N1V8 ABCD1P5-201ENST00000445663 754 ntBASIC11.27□□□□□ -0.61
LINC01561Q8N1V8 AC104076.2-201ENST00000448912 469 ntBASIC11.27□□□□□ -0.61
LINC01561Q8N1V8 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC11.27□□□□□ -0.61
LINC01561Q8N1V8 KRT17P6-201ENST00000453795 1220 ntBASIC11.27□□□□□ -0.61
LINC01561Q8N1V8 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
LINC01561Q8N1V8 AC096582.2-201ENST00000510860 516 ntBASIC11.27□□□□□ -0.61
LINC01561Q8N1V8 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC11.27□□□□□ -0.61
LINC01561Q8N1V8 AC091167.2-201ENST00000579581 588 ntBASIC11.27□□□□□ -0.61
LINC01561Q8N1V8 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC11.27□□□□□ -0.61
LINC01561Q8N1V8 AP005901.3-202ENST00000581653 237 ntBASIC11.27□□□□□ -0.61
LINC01561Q8N1V8 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC11.27□□□□□ -0.61
LINC01561Q8N1V8 GZMM-202ENST00000592501 941 ntTSL 3 BASIC11.27□□□□□ -0.61
LINC01561Q8N1V8 BNIP3P18-201ENST00000593976 575 ntBASIC11.27□□□□□ -0.61
LINC01561Q8N1V8 SIGLEC29P-201ENST00000599873 1114 ntBASIC11.27□□□□□ -0.61
LINC01561Q8N1V8 COPE-211ENST00000600932 1144 ntTSL 5 BASIC11.27□□□□□ -0.61
LINC01561Q8N1V8 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
LINC01561Q8N1V8 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC11.27□□□□□ -0.61
LINC01561Q8N1V8 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC11.27□□□□□ -0.61
LINC01561Q8N1V8 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC11.27□□□□□ -0.61
LINC01561Q8N1V8 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC11.27□□□□□ -0.61
LINC01561Q8N1V8 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
LINC01561Q8N1V8 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
LINC01561Q8N1V8 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
LINC01561Q8N1V8 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
LINC01561Q8N1V8 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
LINC01561Q8N1V8 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC11.27□□□□□ -0.61
LINC01561Q8N1V8 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC11.27□□□□□ -0.61
LINC01561Q8N1V8 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
LINC01561Q8N1V8 AC004817.3-201ENST00000602957 2129 ntBASIC11.27□□□□□ -0.61
LINC01561Q8N1V8 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
LINC01561Q8N1V8 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC11.27□□□□□ -0.61
LINC01561Q8N1V8 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
LINC01561Q8N1V8 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC11.27□□□□□ -0.61
LINC01561Q8N1V8 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
LINC01561Q8N1V8 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
LINC01561Q8N1V8 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC11.27□□□□□ -0.61
LINC01561Q8N1V8 AC105917.1-201ENST00000506637 2539 ntBASIC11.27□□□□□ -0.61
LINC01561Q8N1V8 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
LINC01561Q8N1V8 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms