Protein–RNA interactions for Protein: Q8IUZ0

LRRC49, Leucine-rich repeat-containing protein 49, humanhuman

Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC49Q8IUZ0 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
LRRC49Q8IUZ0 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
LRRC49Q8IUZ0 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LRRC49Q8IUZ0 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
LRRC49Q8IUZ0 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
LRRC49Q8IUZ0 FALEC-201ENST00000416894 566 ntTSL 3 BASIC17.07■□□□□ 0.32
LRRC49Q8IUZ0 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC17.07■□□□□ 0.32
LRRC49Q8IUZ0 FIS1-203ENST00000442303 631 ntTSL 3 BASIC17.07■□□□□ 0.32
LRRC49Q8IUZ0 KRT18P3-201ENST00000451602 1288 ntBASIC17.07■□□□□ 0.32
LRRC49Q8IUZ0 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LRRC49Q8IUZ0 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC17.07■□□□□ 0.32
LRRC49Q8IUZ0 NMU-203ENST00000507338 658 ntTSL 3 BASIC17.07■□□□□ 0.32
LRRC49Q8IUZ0 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC17.07■□□□□ 0.32
LRRC49Q8IUZ0 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
LRRC49Q8IUZ0 MED16-214ENST00000617672 554 ntTSL 5 BASIC17.07■□□□□ 0.32
LRRC49Q8IUZ0 AC004877.2-201ENST00000623941 599 ntBASIC17.07■□□□□ 0.32
LRRC49Q8IUZ0 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC17.07■□□□□ 0.32
LRRC49Q8IUZ0 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LRRC49Q8IUZ0 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LRRC49Q8IUZ0 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LRRC49Q8IUZ0 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC17.07■□□□□ 0.32
LRRC49Q8IUZ0 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LRRC49Q8IUZ0 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LRRC49Q8IUZ0 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
LRRC49Q8IUZ0 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LRRC49Q8IUZ0 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LRRC49Q8IUZ0 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LRRC49Q8IUZ0 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
LRRC49Q8IUZ0 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC17.07■□□□□ 0.32
LRRC49Q8IUZ0 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.06■□□□□ 0.32
LRRC49Q8IUZ0 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
LRRC49Q8IUZ0 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LRRC49Q8IUZ0 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LRRC49Q8IUZ0 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.06■□□□□ 0.32
LRRC49Q8IUZ0 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC17.06■□□□□ 0.32
LRRC49Q8IUZ0 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
LRRC49Q8IUZ0 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
LRRC49Q8IUZ0 MED15P5-201ENST00000423150 992 ntBASIC17.06■□□□□ 0.32
LRRC49Q8IUZ0 KRT18P2-201ENST00000447938 1258 ntBASIC17.06■□□□□ 0.32
LRRC49Q8IUZ0 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC17.06■□□□□ 0.32
LRRC49Q8IUZ0 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC17.06■□□□□ 0.32
LRRC49Q8IUZ0 KRT19P2-202ENST00000557173 1012 ntBASIC17.06■□□□□ 0.32
LRRC49Q8IUZ0 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC17.06■□□□□ 0.32
LRRC49Q8IUZ0 AL031055.1-201ENST00000606362 631 ntBASIC17.06■□□□□ 0.32
LRRC49Q8IUZ0 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
LRRC49Q8IUZ0 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LRRC49Q8IUZ0 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LRRC49Q8IUZ0 GGT3P-204ENST00000453783 1664 ntBASIC17.06■□□□□ 0.32
LRRC49Q8IUZ0 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LRRC49Q8IUZ0 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
LRRC49Q8IUZ0 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LRRC49Q8IUZ0 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LRRC49Q8IUZ0 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
LRRC49Q8IUZ0 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LRRC49Q8IUZ0 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LRRC49Q8IUZ0 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC17.06■□□□□ 0.32
LRRC49Q8IUZ0 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
LRRC49Q8IUZ0 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC17.05■□□□□ 0.32
LRRC49Q8IUZ0 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC17.05■□□□□ 0.32
LRRC49Q8IUZ0 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LRRC49Q8IUZ0 BCAR1-209ENST00000546196 1340 ntBASIC17.05■□□□□ 0.32
LRRC49Q8IUZ0 AL031731.1-201ENST00000642131 2094 ntBASIC17.05■□□□□ 0.32
LRRC49Q8IUZ0 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
LRRC49Q8IUZ0 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LRRC49Q8IUZ0 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LRRC49Q8IUZ0 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
LRRC49Q8IUZ0 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
LRRC49Q8IUZ0 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
LRRC49Q8IUZ0 CD99-202ENST00000381180 530 ntTSL 2 BASIC17.05■□□□□ 0.32
LRRC49Q8IUZ0 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
LRRC49Q8IUZ0 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LRRC49Q8IUZ0 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC17.05■□□□□ 0.32
LRRC49Q8IUZ0 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LRRC49Q8IUZ0 AC007967.2-201ENST00000432613 625 ntBASIC17.05■□□□□ 0.32
LRRC49Q8IUZ0 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC17.05■□□□□ 0.32
LRRC49Q8IUZ0 AC140658.5-201ENST00000438532 169 ntBASIC17.05■□□□□ 0.32
LRRC49Q8IUZ0 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LRRC49Q8IUZ0 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC17.05■□□□□ 0.32
LRRC49Q8IUZ0 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC17.05■□□□□ 0.32
LRRC49Q8IUZ0 SMN2-210ENST00000511812 867 ntTSL 2 BASIC17.05■□□□□ 0.32
LRRC49Q8IUZ0 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
LRRC49Q8IUZ0 AC140113.2-201ENST00000604370 208 ntBASIC17.05■□□□□ 0.32
LRRC49Q8IUZ0 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC17.05■□□□□ 0.32
LRRC49Q8IUZ0 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LRRC49Q8IUZ0 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
LRRC49Q8IUZ0 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
LRRC49Q8IUZ0 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC17.05■□□□□ 0.32
LRRC49Q8IUZ0 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC17.05■□□□□ 0.32
LRRC49Q8IUZ0 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC17.05■□□□□ 0.32
LRRC49Q8IUZ0 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LRRC49Q8IUZ0 GPAA1P2-202ENST00000606848 1787 ntBASIC17.05■□□□□ 0.32
LRRC49Q8IUZ0 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LRRC49Q8IUZ0 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
LRRC49Q8IUZ0 AC025580.3-201ENST00000617932 1424 ntBASIC17.04■□□□□ 0.32
LRRC49Q8IUZ0 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
LRRC49Q8IUZ0 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
LRRC49Q8IUZ0 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
LRRC49Q8IUZ0 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
LRRC49Q8IUZ0 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.04■□□□□ 0.32
LRRC49Q8IUZ0 REM2-202ENST00000536884 1331 ntTSL 2 BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms