Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
LRRTM1Q86UE6 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
LRRTM1Q86UE6 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LRRTM1Q86UE6 AC002310.6-201ENST00000624451 1377 ntBASIC14.58□□□□□ -0.08
LRRTM1Q86UE6 AL671710.1-201ENST00000610245 2349 ntBASIC14.58□□□□□ -0.08
LRRTM1Q86UE6 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LRRTM1Q86UE6 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
LRRTM1Q86UE6 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC14.58□□□□□ -0.08
LRRTM1Q86UE6 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
LRRTM1Q86UE6 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LRRTM1Q86UE6 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LRRTM1Q86UE6 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LRRTM1Q86UE6 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC14.57□□□□□ -0.08
LRRTM1Q86UE6 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC14.57□□□□□ -0.08
LRRTM1Q86UE6 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LRRTM1Q86UE6 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC14.57□□□□□ -0.08
LRRTM1Q86UE6 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
LRRTM1Q86UE6 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC14.57□□□□□ -0.08
LRRTM1Q86UE6 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
LRRTM1Q86UE6 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC14.57□□□□□ -0.08
LRRTM1Q86UE6 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
LRRTM1Q86UE6 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC14.57□□□□□ -0.08
LRRTM1Q86UE6 AC006449.6-201ENST00000612330 2296 ntBASIC14.57□□□□□ -0.08
LRRTM1Q86UE6 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
LRRTM1Q86UE6 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LRRTM1Q86UE6 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LRRTM1Q86UE6 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LRRTM1Q86UE6 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC14.57□□□□□ -0.08
LRRTM1Q86UE6 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LRRTM1Q86UE6 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LRRTM1Q86UE6 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LRRTM1Q86UE6 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LRRTM1Q86UE6 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LRRTM1Q86UE6 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
LRRTM1Q86UE6 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
LRRTM1Q86UE6 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC14.57□□□□□ -0.08
LRRTM1Q86UE6 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LRRTM1Q86UE6 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LRRTM1Q86UE6 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LRRTM1Q86UE6 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC14.57□□□□□ -0.08
LRRTM1Q86UE6 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
LRRTM1Q86UE6 AC104076.2-201ENST00000448912 469 ntBASIC14.57□□□□□ -0.08
LRRTM1Q86UE6 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC14.57□□□□□ -0.08
LRRTM1Q86UE6 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
LRRTM1Q86UE6 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LRRTM1Q86UE6 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC14.57□□□□□ -0.08
LRRTM1Q86UE6 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC14.57□□□□□ -0.08
LRRTM1Q86UE6 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC14.57□□□□□ -0.08
LRRTM1Q86UE6 TERC-201ENST00000602385 541 ntBASIC14.57□□□□□ -0.08
LRRTM1Q86UE6 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC14.57□□□□□ -0.08
LRRTM1Q86UE6 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
LRRTM1Q86UE6 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LRRTM1Q86UE6 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC14.57□□□□□ -0.08
LRRTM1Q86UE6 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC14.57□□□□□ -0.08
LRRTM1Q86UE6 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
LRRTM1Q86UE6 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LRRTM1Q86UE6 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC14.57□□□□□ -0.08
LRRTM1Q86UE6 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC14.57□□□□□ -0.08
LRRTM1Q86UE6 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LRRTM1Q86UE6 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
LRRTM1Q86UE6 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
LRRTM1Q86UE6 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC14.57□□□□□ -0.08
LRRTM1Q86UE6 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC14.57□□□□□ -0.08
LRRTM1Q86UE6 AC243591.1-201ENST00000452967 1364 ntBASIC14.57□□□□□ -0.08
LRRTM1Q86UE6 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LRRTM1Q86UE6 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC14.57□□□□□ -0.08
LRRTM1Q86UE6 AC126177.1-201ENST00000547829 2218 ntBASIC14.57□□□□□ -0.08
LRRTM1Q86UE6 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC14.57□□□□□ -0.08
LRRTM1Q86UE6 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LRRTM1Q86UE6 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LRRTM1Q86UE6 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LRRTM1Q86UE6 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
LRRTM1Q86UE6 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LRRTM1Q86UE6 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
LRRTM1Q86UE6 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LRRTM1Q86UE6 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
LRRTM1Q86UE6 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
LRRTM1Q86UE6 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LRRTM1Q86UE6 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LRRTM1Q86UE6 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LRRTM1Q86UE6 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC14.56□□□□□ -0.08
LRRTM1Q86UE6 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LRRTM1Q86UE6 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC14.56□□□□□ -0.08
LRRTM1Q86UE6 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LRRTM1Q86UE6 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
LRRTM1Q86UE6 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC14.56□□□□□ -0.08
LRRTM1Q86UE6 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC14.56□□□□□ -0.08
LRRTM1Q86UE6 AC093827.2-201ENST00000512654 315 ntBASIC14.56□□□□□ -0.08
LRRTM1Q86UE6 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC14.56□□□□□ -0.08
LRRTM1Q86UE6 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC14.56□□□□□ -0.08
LRRTM1Q86UE6 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC14.56□□□□□ -0.08
LRRTM1Q86UE6 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC14.56□□□□□ -0.08
LRRTM1Q86UE6 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC14.56□□□□□ -0.08
LRRTM1Q86UE6 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
LRRTM1Q86UE6 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC14.56□□□□□ -0.08
LRRTM1Q86UE6 SP100-205ENST00000409824 1802 ntTSL 5 BASIC14.56□□□□□ -0.08
LRRTM1Q86UE6 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC14.56□□□□□ -0.08
LRRTM1Q86UE6 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC14.56□□□□□ -0.08
LRRTM1Q86UE6 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
LRRTM1Q86UE6 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms