Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SCXQ7RTU7 TPR-209ENST00000613151 2478 ntTSL 5 BASIC11.17□□□□□ -0.62
SCXQ7RTU7 AL096828.2-201ENST00000567259 1965 ntBASIC11.17□□□□□ -0.62
SCXQ7RTU7 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
SCXQ7RTU7 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
SCXQ7RTU7 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SCXQ7RTU7 AP001094.4-201ENST00000579008 2176 ntBASIC11.17□□□□□ -0.62
SCXQ7RTU7 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC11.17□□□□□ -0.62
SCXQ7RTU7 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
SCXQ7RTU7 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC11.17□□□□□ -0.62
SCXQ7RTU7 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC11.17□□□□□ -0.62
SCXQ7RTU7 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SCXQ7RTU7 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SCXQ7RTU7 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
SCXQ7RTU7 AC004817.3-201ENST00000602957 2129 ntBASIC11.17□□□□□ -0.62
SCXQ7RTU7 REXO1L9P-201ENST00000604264 2108 ntBASIC11.17□□□□□ -0.62
SCXQ7RTU7 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
SCXQ7RTU7 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
SCXQ7RTU7 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC11.17□□□□□ -0.62
SCXQ7RTU7 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
SCXQ7RTU7 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
SCXQ7RTU7 AGK-211ENST00000629555 2765 ntTSL 5 BASIC11.16□□□□□ -0.62
SCXQ7RTU7 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
SCXQ7RTU7 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
SCXQ7RTU7 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
SCXQ7RTU7 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC11.16□□□□□ -0.62
SCXQ7RTU7 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC11.16□□□□□ -0.62
SCXQ7RTU7 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC11.16□□□□□ -0.62
SCXQ7RTU7 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC11.16□□□□□ -0.62
SCXQ7RTU7 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC11.16□□□□□ -0.62
SCXQ7RTU7 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC11.16□□□□□ -0.62
SCXQ7RTU7 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
SCXQ7RTU7 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
SCXQ7RTU7 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC11.16□□□□□ -0.62
SCXQ7RTU7 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
SCXQ7RTU7 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC11.16□□□□□ -0.62
SCXQ7RTU7 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
SCXQ7RTU7 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
SCXQ7RTU7 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC11.16□□□□□ -0.62
SCXQ7RTU7 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
SCXQ7RTU7 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
SCXQ7RTU7 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC11.16□□□□□ -0.62
SCXQ7RTU7 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC11.16□□□□□ -0.62
SCXQ7RTU7 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
SCXQ7RTU7 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC11.16□□□□□ -0.62
SCXQ7RTU7 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
SCXQ7RTU7 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC11.16□□□□□ -0.62
SCXQ7RTU7 SPDYE21P-201ENST00000413323 827 ntBASIC11.16□□□□□ -0.62
SCXQ7RTU7 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC11.16□□□□□ -0.62
SCXQ7RTU7 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC11.16□□□□□ -0.62
SCXQ7RTU7 KRT18P3-201ENST00000451602 1288 ntBASIC11.16□□□□□ -0.62
SCXQ7RTU7 PON3-205ENST00000451904 1053 ntTSL 3 BASIC11.16□□□□□ -0.62
SCXQ7RTU7 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC11.16□□□□□ -0.62
SCXQ7RTU7 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC11.16□□□□□ -0.62
SCXQ7RTU7 UNC93B6-202ENST00000528242 690 ntBASIC11.16□□□□□ -0.62
SCXQ7RTU7 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC11.16□□□□□ -0.62
SCXQ7RTU7 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC11.16□□□□□ -0.62
SCXQ7RTU7 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC11.16□□□□□ -0.62
SCXQ7RTU7 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC11.16□□□□□ -0.62
SCXQ7RTU7 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
SCXQ7RTU7 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
SCXQ7RTU7 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC11.16□□□□□ -0.62
SCXQ7RTU7 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC11.16□□□□□ -0.62
SCXQ7RTU7 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC11.16□□□□□ -0.62
SCXQ7RTU7 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
SCXQ7RTU7 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
SCXQ7RTU7 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
SCXQ7RTU7 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
SCXQ7RTU7 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
SCXQ7RTU7 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC11.16□□□□□ -0.62
SCXQ7RTU7 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC11.16□□□□□ -0.62
SCXQ7RTU7 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
SCXQ7RTU7 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
SCXQ7RTU7 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
SCXQ7RTU7 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
SCXQ7RTU7 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
SCXQ7RTU7 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
SCXQ7RTU7 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC11.16□□□□□ -0.62
SCXQ7RTU7 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
SCXQ7RTU7 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
SCXQ7RTU7 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
SCXQ7RTU7 PGR-209ENST00000617858 2816 ntTSL 5 BASIC11.16□□□□□ -0.62
SCXQ7RTU7 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
SCXQ7RTU7 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
SCXQ7RTU7 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC11.16□□□□□ -0.62
SCXQ7RTU7 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC11.16□□□□□ -0.62
SCXQ7RTU7 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC11.16□□□□□ -0.62
SCXQ7RTU7 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
SCXQ7RTU7 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
SCXQ7RTU7 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
SCXQ7RTU7 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
SCXQ7RTU7 PCDHA1-201ENST00000378133 2726 ntBASIC11.15□□□□□ -0.62
SCXQ7RTU7 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.62
SCXQ7RTU7 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC11.15□□□□□ -0.62
SCXQ7RTU7 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC11.15□□□□□ -0.62
SCXQ7RTU7 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC11.15□□□□□ -0.62
SCXQ7RTU7 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
SCXQ7RTU7 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC11.15□□□□□ -0.62
SCXQ7RTU7 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC11.15□□□□□ -0.62
SCXQ7RTU7 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms