Protein–RNA interactions for Protein: Q6IN85

PPP4R3A, Serine/threonine-protein phosphatase 4 regulatory subunit 3A, humanhuman

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3AQ6IN85 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
PPP4R3AQ6IN85 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC19■□□□□ 0.63
PPP4R3AQ6IN85 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PPP4R3AQ6IN85 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC19■□□□□ 0.63
PPP4R3AQ6IN85 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
PPP4R3AQ6IN85 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC19■□□□□ 0.63
PPP4R3AQ6IN85 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC19■□□□□ 0.63
PPP4R3AQ6IN85 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC19■□□□□ 0.63
PPP4R3AQ6IN85 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC19■□□□□ 0.63
PPP4R3AQ6IN85 AC023274.1-201ENST00000418278 595 ntBASIC19■□□□□ 0.63
PPP4R3AQ6IN85 MCCD1P2-201ENST00000423228 335 ntBASIC19■□□□□ 0.63
PPP4R3AQ6IN85 WDR53-204ENST00000433160 887 ntTSL 5 BASIC19■□□□□ 0.63
PPP4R3AQ6IN85 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC19■□□□□ 0.63
PPP4R3AQ6IN85 AC140658.5-201ENST00000438532 169 ntBASIC19■□□□□ 0.63
PPP4R3AQ6IN85 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC19■□□□□ 0.63
PPP4R3AQ6IN85 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC19■□□□□ 0.63
PPP4R3AQ6IN85 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC19■□□□□ 0.63
PPP4R3AQ6IN85 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC19■□□□□ 0.63
PPP4R3AQ6IN85 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC19■□□□□ 0.63
PPP4R3AQ6IN85 AC002347.1-201ENST00000569543 541 ntBASIC19■□□□□ 0.63
PPP4R3AQ6IN85 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PPP4R3AQ6IN85 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
PPP4R3AQ6IN85 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC19■□□□□ 0.63
PPP4R3AQ6IN85 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC19■□□□□ 0.63
PPP4R3AQ6IN85 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC19■□□□□ 0.63
PPP4R3AQ6IN85 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
PPP4R3AQ6IN85 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
PPP4R3AQ6IN85 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC19■□□□□ 0.63
PPP4R3AQ6IN85 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC19■□□□□ 0.63
PPP4R3AQ6IN85 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
PPP4R3AQ6IN85 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC19■□□□□ 0.63
PPP4R3AQ6IN85 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
PPP4R3AQ6IN85 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
PPP4R3AQ6IN85 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PPP4R3AQ6IN85 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PPP4R3AQ6IN85 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC19■□□□□ 0.63
PPP4R3AQ6IN85 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC19■□□□□ 0.63
PPP4R3AQ6IN85 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PPP4R3AQ6IN85 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PPP4R3AQ6IN85 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC18.99■□□□□ 0.63
PPP4R3AQ6IN85 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PPP4R3AQ6IN85 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC18.99■□□□□ 0.63
PPP4R3AQ6IN85 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PPP4R3AQ6IN85 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC18.99■□□□□ 0.63
PPP4R3AQ6IN85 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
PPP4R3AQ6IN85 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PPP4R3AQ6IN85 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC18.99■□□□□ 0.63
PPP4R3AQ6IN85 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PPP4R3AQ6IN85 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC18.99■□□□□ 0.63
PPP4R3AQ6IN85 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PPP4R3AQ6IN85 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
PPP4R3AQ6IN85 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC18.99■□□□□ 0.63
PPP4R3AQ6IN85 PMS2P4-201ENST00000412466 1052 ntBASIC18.99■□□□□ 0.63
PPP4R3AQ6IN85 CDK2AP2P3-201ENST00000422476 372 ntBASIC18.99■□□□□ 0.63
PPP4R3AQ6IN85 STARD13-205ENST00000439831 945 ntTSL 2 BASIC18.99■□□□□ 0.63
PPP4R3AQ6IN85 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC18.99■□□□□ 0.63
PPP4R3AQ6IN85 AC109635.5-201ENST00000533593 962 ntBASIC18.99■□□□□ 0.63
PPP4R3AQ6IN85 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC18.99■□□□□ 0.63
PPP4R3AQ6IN85 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC18.99■□□□□ 0.63
PPP4R3AQ6IN85 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
PPP4R3AQ6IN85 NKILA-202ENST00000614771 2598 ntBASIC18.99■□□□□ 0.63
PPP4R3AQ6IN85 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC18.99■□□□□ 0.63
PPP4R3AQ6IN85 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
PPP4R3AQ6IN85 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC18.99■□□□□ 0.63
PPP4R3AQ6IN85 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC18.99■□□□□ 0.63
PPP4R3AQ6IN85 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PPP4R3AQ6IN85 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC18.98■□□□□ 0.63
PPP4R3AQ6IN85 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC18.98■□□□□ 0.63
PPP4R3AQ6IN85 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PPP4R3AQ6IN85 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PPP4R3AQ6IN85 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC18.98■□□□□ 0.63
PPP4R3AQ6IN85 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PPP4R3AQ6IN85 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
PPP4R3AQ6IN85 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PPP4R3AQ6IN85 FLJ38576-201ENST00000623820 2459 ntBASIC18.98■□□□□ 0.63
PPP4R3AQ6IN85 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC18.98■□□□□ 0.63
PPP4R3AQ6IN85 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC18.98■□□□□ 0.63
PPP4R3AQ6IN85 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PPP4R3AQ6IN85 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
PPP4R3AQ6IN85 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PPP4R3AQ6IN85 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PPP4R3AQ6IN85 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
PPP4R3AQ6IN85 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PPP4R3AQ6IN85 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
PPP4R3AQ6IN85 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC18.98■□□□□ 0.63
PPP4R3AQ6IN85 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PPP4R3AQ6IN85 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC18.98■□□□□ 0.63
PPP4R3AQ6IN85 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC18.98■□□□□ 0.63
PPP4R3AQ6IN85 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC18.98■□□□□ 0.63
PPP4R3AQ6IN85 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC18.98■□□□□ 0.63
PPP4R3AQ6IN85 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PPP4R3AQ6IN85 AC068137.2-201ENST00000605408 478 ntBASIC18.98■□□□□ 0.63
PPP4R3AQ6IN85 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC18.98■□□□□ 0.63
PPP4R3AQ6IN85 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
PPP4R3AQ6IN85 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PPP4R3AQ6IN85 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PPP4R3AQ6IN85 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PPP4R3AQ6IN85 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PPP4R3AQ6IN85 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC18.98■□□□□ 0.63
PPP4R3AQ6IN85 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms