Protein–RNA interactions for Protein: Q5VWM5

PRAMEF9, PRAME family member 9/15, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF9Q5VWM5 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PRAMEF9Q5VWM5 SLC9A3P2-201ENST00000447821 2021 ntBASIC16.09■□□□□ 0.17
PRAMEF9Q5VWM5 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
PRAMEF9Q5VWM5 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PRAMEF9Q5VWM5 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
PRAMEF9Q5VWM5 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
PRAMEF9Q5VWM5 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PRAMEF9Q5VWM5 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC16.09■□□□□ 0.17
PRAMEF9Q5VWM5 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
PRAMEF9Q5VWM5 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC16.09■□□□□ 0.17
PRAMEF9Q5VWM5 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC16.09■□□□□ 0.17
PRAMEF9Q5VWM5 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PRAMEF9Q5VWM5 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
PRAMEF9Q5VWM5 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
PRAMEF9Q5VWM5 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC16.09■□□□□ 0.17
PRAMEF9Q5VWM5 DDT-204ENST00000404092 805 ntTSL 3 BASIC16.09■□□□□ 0.17
PRAMEF9Q5VWM5 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC16.09■□□□□ 0.17
PRAMEF9Q5VWM5 KRT18P2-201ENST00000447938 1258 ntBASIC16.09■□□□□ 0.17
PRAMEF9Q5VWM5 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
PRAMEF9Q5VWM5 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC16.09■□□□□ 0.17
PRAMEF9Q5VWM5 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PRAMEF9Q5VWM5 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC16.09■□□□□ 0.17
PRAMEF9Q5VWM5 MIR4515-201ENST00000584082 81 ntBASIC16.09■□□□□ 0.17
PRAMEF9Q5VWM5 KLK8-205ENST00000593490 267 ntTSL 3 BASIC16.09■□□□□ 0.17
PRAMEF9Q5VWM5 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC16.09■□□□□ 0.17
PRAMEF9Q5VWM5 AC010507.1-201ENST00000633895 436 ntBASIC16.09■□□□□ 0.17
PRAMEF9Q5VWM5 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC16.09■□□□□ 0.17
PRAMEF9Q5VWM5 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PRAMEF9Q5VWM5 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.09■□□□□ 0.17
PRAMEF9Q5VWM5 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
PRAMEF9Q5VWM5 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PRAMEF9Q5VWM5 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC16.09■□□□□ 0.17
PRAMEF9Q5VWM5 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PRAMEF9Q5VWM5 AC104109.2-201ENST00000602919 1418 ntBASIC16.09■□□□□ 0.17
PRAMEF9Q5VWM5 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
PRAMEF9Q5VWM5 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC16.09■□□□□ 0.17
PRAMEF9Q5VWM5 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PRAMEF9Q5VWM5 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PRAMEF9Q5VWM5 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PRAMEF9Q5VWM5 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
PRAMEF9Q5VWM5 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PRAMEF9Q5VWM5 AC012569.1-201ENST00000591191 1524 ntBASIC16.09■□□□□ 0.17
PRAMEF9Q5VWM5 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
PRAMEF9Q5VWM5 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PRAMEF9Q5VWM5 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
PRAMEF9Q5VWM5 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PRAMEF9Q5VWM5 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.09■□□□□ 0.17
PRAMEF9Q5VWM5 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
PRAMEF9Q5VWM5 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
PRAMEF9Q5VWM5 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
PRAMEF9Q5VWM5 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC16.08■□□□□ 0.17
PRAMEF9Q5VWM5 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC16.08■□□□□ 0.17
PRAMEF9Q5VWM5 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
PRAMEF9Q5VWM5 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
PRAMEF9Q5VWM5 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC16.08■□□□□ 0.17
PRAMEF9Q5VWM5 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
PRAMEF9Q5VWM5 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PRAMEF9Q5VWM5 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PRAMEF9Q5VWM5 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
PRAMEF9Q5VWM5 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
PRAMEF9Q5VWM5 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PRAMEF9Q5VWM5 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC16.08■□□□□ 0.16
PRAMEF9Q5VWM5 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PRAMEF9Q5VWM5 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PRAMEF9Q5VWM5 CRYGEP-201ENST00000412192 528 ntBASIC16.08■□□□□ 0.16
PRAMEF9Q5VWM5 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
PRAMEF9Q5VWM5 RHOQP3-201ENST00000437982 621 ntBASIC16.08■□□□□ 0.16
PRAMEF9Q5VWM5 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC16.08■□□□□ 0.16
PRAMEF9Q5VWM5 AC079776.4-201ENST00000511039 504 ntBASIC16.08■□□□□ 0.16
PRAMEF9Q5VWM5 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC16.08■□□□□ 0.16
PRAMEF9Q5VWM5 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC16.08■□□□□ 0.16
PRAMEF9Q5VWM5 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC16.08■□□□□ 0.16
PRAMEF9Q5VWM5 SLC25A1P1-201ENST00000528351 927 ntBASIC16.08■□□□□ 0.16
PRAMEF9Q5VWM5 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC16.08■□□□□ 0.16
PRAMEF9Q5VWM5 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC16.08■□□□□ 0.16
PRAMEF9Q5VWM5 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PRAMEF9Q5VWM5 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PRAMEF9Q5VWM5 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC16.08■□□□□ 0.16
PRAMEF9Q5VWM5 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC16.08■□□□□ 0.16
PRAMEF9Q5VWM5 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
PRAMEF9Q5VWM5 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC16.08■□□□□ 0.16
PRAMEF9Q5VWM5 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PRAMEF9Q5VWM5 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
PRAMEF9Q5VWM5 IL9RP2-201ENST00000423948 1312 ntBASIC16.08■□□□□ 0.16
PRAMEF9Q5VWM5 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PRAMEF9Q5VWM5 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PRAMEF9Q5VWM5 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC16.08■□□□□ 0.16
PRAMEF9Q5VWM5 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC16.08■□□□□ 0.16
PRAMEF9Q5VWM5 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC16.08■□□□□ 0.16
PRAMEF9Q5VWM5 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PRAMEF9Q5VWM5 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC16.08■□□□□ 0.16
PRAMEF9Q5VWM5 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
PRAMEF9Q5VWM5 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
PRAMEF9Q5VWM5 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
PRAMEF9Q5VWM5 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
PRAMEF9Q5VWM5 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC16.08■□□□□ 0.16
PRAMEF9Q5VWM5 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PRAMEF9Q5VWM5 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC16.08■□□□□ 0.16
PRAMEF9Q5VWM5 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PRAMEF9Q5VWM5 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms