Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC20■□□□□ 0.79
RNF20Q5VTR2 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
RNF20Q5VTR2 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC20■□□□□ 0.79
RNF20Q5VTR2 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RNF20Q5VTR2 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RNF20Q5VTR2 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC20■□□□□ 0.79
RNF20Q5VTR2 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
RNF20Q5VTR2 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
RNF20Q5VTR2 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RNF20Q5VTR2 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RNF20Q5VTR2 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
RNF20Q5VTR2 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC20■□□□□ 0.79
RNF20Q5VTR2 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RNF20Q5VTR2 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
RNF20Q5VTR2 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RNF20Q5VTR2 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RNF20Q5VTR2 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RNF20Q5VTR2 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
RNF20Q5VTR2 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
RNF20Q5VTR2 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC19.99■□□□□ 0.79
RNF20Q5VTR2 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RNF20Q5VTR2 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RNF20Q5VTR2 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC19.99■□□□□ 0.79
RNF20Q5VTR2 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RNF20Q5VTR2 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RNF20Q5VTR2 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
RNF20Q5VTR2 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RNF20Q5VTR2 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC19.99■□□□□ 0.79
RNF20Q5VTR2 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC19.99■□□□□ 0.79
RNF20Q5VTR2 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC19.99■□□□□ 0.79
RNF20Q5VTR2 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC19.99■□□□□ 0.79
RNF20Q5VTR2 OR7E47P-204ENST00000575924 449 ntBASIC19.99■□□□□ 0.79
RNF20Q5VTR2 CYB561-216ENST00000582297 897 ntTSL 3 BASIC19.99■□□□□ 0.79
RNF20Q5VTR2 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
RNF20Q5VTR2 AC116407.3-201ENST00000623905 1129 ntBASIC19.99■□□□□ 0.79
RNF20Q5VTR2 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC19.99■□□□□ 0.79
RNF20Q5VTR2 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
RNF20Q5VTR2 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RNF20Q5VTR2 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RNF20Q5VTR2 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
RNF20Q5VTR2 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
RNF20Q5VTR2 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RNF20Q5VTR2 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC19.99■□□□□ 0.79
RNF20Q5VTR2 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RNF20Q5VTR2 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC19.98■□□□□ 0.79
RNF20Q5VTR2 AL671710.1-201ENST00000610245 2349 ntBASIC19.98■□□□□ 0.79
RNF20Q5VTR2 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RNF20Q5VTR2 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
RNF20Q5VTR2 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
RNF20Q5VTR2 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RNF20Q5VTR2 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RNF20Q5VTR2 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RNF20Q5VTR2 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC19.98■□□□□ 0.79
RNF20Q5VTR2 CDK2AP2P3-201ENST00000422476 372 ntBASIC19.98■□□□□ 0.79
RNF20Q5VTR2 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC19.98■□□□□ 0.79
RNF20Q5VTR2 STARD13-205ENST00000439831 945 ntTSL 2 BASIC19.98■□□□□ 0.79
RNF20Q5VTR2 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC19.98■□□□□ 0.79
RNF20Q5VTR2 RNA5SP419-201ENST00000515908 135 ntBASIC19.98■□□□□ 0.79
RNF20Q5VTR2 MMP17-203ENST00000535004 719 ntTSL 3 BASIC19.98■□□□□ 0.79
RNF20Q5VTR2 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
RNF20Q5VTR2 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC19.98■□□□□ 0.79
RNF20Q5VTR2 LITAF-211ENST00000572255 516 ntTSL 4 BASIC19.98■□□□□ 0.79
RNF20Q5VTR2 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC19.98■□□□□ 0.79
RNF20Q5VTR2 MIR4751-201ENST00000578027 74 ntBASIC19.98■□□□□ 0.79
RNF20Q5VTR2 SLC25A6P4-201ENST00000586535 553 ntBASIC19.98■□□□□ 0.79
RNF20Q5VTR2 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC19.98■□□□□ 0.79
RNF20Q5VTR2 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RNF20Q5VTR2 AL512652.2-201ENST00000625156 1716 ntBASIC19.98■□□□□ 0.79
RNF20Q5VTR2 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RNF20Q5VTR2 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RNF20Q5VTR2 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RNF20Q5VTR2 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RNF20Q5VTR2 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RNF20Q5VTR2 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RNF20Q5VTR2 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RNF20Q5VTR2 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC19.97■□□□□ 0.79
RNF20Q5VTR2 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RNF20Q5VTR2 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC19.97■□□□□ 0.79
RNF20Q5VTR2 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
RNF20Q5VTR2 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC19.97■□□□□ 0.79
RNF20Q5VTR2 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
RNF20Q5VTR2 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC19.97■□□□□ 0.79
RNF20Q5VTR2 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RNF20Q5VTR2 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC19.97■□□□□ 0.79
RNF20Q5VTR2 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RNF20Q5VTR2 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
RNF20Q5VTR2 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RNF20Q5VTR2 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RNF20Q5VTR2 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
RNF20Q5VTR2 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RNF20Q5VTR2 FAM185BP-201ENST00000443595 716 ntBASIC19.97■□□□□ 0.79
RNF20Q5VTR2 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RNF20Q5VTR2 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC19.97■□□□□ 0.79
RNF20Q5VTR2 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC19.97■□□□□ 0.79
RNF20Q5VTR2 WT1-AS_2.1-201ENST00000613208 137 ntBASIC19.97■□□□□ 0.79
RNF20Q5VTR2 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC19.97■□□□□ 0.79
RNF20Q5VTR2 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC19.97■□□□□ 0.79
RNF20Q5VTR2 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
RNF20Q5VTR2 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RNF20Q5VTR2 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms