Protein–RNA interactions for Protein: Q5VT99

LRRC38, Leucine-rich repeat-containing protein 38, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC38Q5VT99 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
LRRC38Q5VT99 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LRRC38Q5VT99 PCDHA1-201ENST00000378133 2726 ntBASIC17.36■□□□□ 0.37
LRRC38Q5VT99 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LRRC38Q5VT99 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
LRRC38Q5VT99 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
LRRC38Q5VT99 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
LRRC38Q5VT99 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
LRRC38Q5VT99 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC17.36■□□□□ 0.37
LRRC38Q5VT99 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LRRC38Q5VT99 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC17.36■□□□□ 0.37
LRRC38Q5VT99 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC17.36■□□□□ 0.37
LRRC38Q5VT99 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LRRC38Q5VT99 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC17.36■□□□□ 0.37
LRRC38Q5VT99 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LRRC38Q5VT99 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRRC38Q5VT99 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRRC38Q5VT99 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
LRRC38Q5VT99 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC17.35■□□□□ 0.37
LRRC38Q5VT99 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LRRC38Q5VT99 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LRRC38Q5VT99 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC17.35■□□□□ 0.37
LRRC38Q5VT99 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.35■□□□□ 0.37
LRRC38Q5VT99 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
LRRC38Q5VT99 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC17.35■□□□□ 0.37
LRRC38Q5VT99 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRRC38Q5VT99 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRRC38Q5VT99 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRRC38Q5VT99 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
LRRC38Q5VT99 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LRRC38Q5VT99 FRMD6-AS1-201ENST00000617151 2229 ntBASIC17.35■□□□□ 0.37
LRRC38Q5VT99 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC17.35■□□□□ 0.37
LRRC38Q5VT99 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
LRRC38Q5VT99 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LRRC38Q5VT99 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
LRRC38Q5VT99 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRRC38Q5VT99 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRRC38Q5VT99 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LRRC38Q5VT99 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC17.35■□□□□ 0.37
LRRC38Q5VT99 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
LRRC38Q5VT99 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
LRRC38Q5VT99 CENPM-204ENST00000402420 688 ntTSL 5 BASIC17.35■□□□□ 0.37
LRRC38Q5VT99 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC17.35■□□□□ 0.37
LRRC38Q5VT99 ATP6V0CP3-201ENST00000417255 467 ntBASIC17.35■□□□□ 0.37
LRRC38Q5VT99 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC17.35■□□□□ 0.37
LRRC38Q5VT99 PPIE-208ENST00000470213 927 ntTSL 3 BASIC17.35■□□□□ 0.37
LRRC38Q5VT99 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC17.35■□□□□ 0.37
LRRC38Q5VT99 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
LRRC38Q5VT99 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC17.35■□□□□ 0.37
LRRC38Q5VT99 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC17.35■□□□□ 0.37
LRRC38Q5VT99 ACTL9-202ENST00000612068 1252 ntBASIC17.35■□□□□ 0.37
LRRC38Q5VT99 AL691432.3-201ENST00000621860 400 ntBASIC17.35■□□□□ 0.37
LRRC38Q5VT99 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC17.35■□□□□ 0.37
LRRC38Q5VT99 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LRRC38Q5VT99 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRRC38Q5VT99 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRRC38Q5VT99 AC012569.1-201ENST00000591191 1524 ntBASIC17.35■□□□□ 0.37
LRRC38Q5VT99 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
LRRC38Q5VT99 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LRRC38Q5VT99 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRRC38Q5VT99 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRRC38Q5VT99 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC17.35■□□□□ 0.37
LRRC38Q5VT99 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRRC38Q5VT99 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRRC38Q5VT99 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC17.35■□□□□ 0.37
LRRC38Q5VT99 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC17.35■□□□□ 0.37
LRRC38Q5VT99 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRRC38Q5VT99 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LRRC38Q5VT99 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LRRC38Q5VT99 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
LRRC38Q5VT99 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LRRC38Q5VT99 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
LRRC38Q5VT99 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LRRC38Q5VT99 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LRRC38Q5VT99 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LRRC38Q5VT99 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC17.34■□□□□ 0.37
LRRC38Q5VT99 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LRRC38Q5VT99 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LRRC38Q5VT99 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LRRC38Q5VT99 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC17.34■□□□□ 0.37
LRRC38Q5VT99 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC17.34■□□□□ 0.37
LRRC38Q5VT99 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC17.34■□□□□ 0.37
LRRC38Q5VT99 FAAHP1-202ENST00000446499 1238 ntBASIC17.34■□□□□ 0.37
LRRC38Q5VT99 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC17.34■□□□□ 0.37
LRRC38Q5VT99 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
LRRC38Q5VT99 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LRRC38Q5VT99 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC17.34■□□□□ 0.37
LRRC38Q5VT99 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC17.34■□□□□ 0.37
LRRC38Q5VT99 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC17.34■□□□□ 0.37
LRRC38Q5VT99 MIR4515-201ENST00000584082 81 ntBASIC17.34■□□□□ 0.37
LRRC38Q5VT99 RPS15-207ENST00000591032 550 ntTSL 3 BASIC17.34■□□□□ 0.37
LRRC38Q5VT99 RPS15-212ENST00000593052 629 ntTSL 2 BASIC17.34■□□□□ 0.37
LRRC38Q5VT99 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC17.34■□□□□ 0.37
LRRC38Q5VT99 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
LRRC38Q5VT99 AC004790.2-201ENST00000623588 572 ntBASIC17.34■□□□□ 0.37
LRRC38Q5VT99 AC148477.8-201ENST00000624298 468 ntBASIC17.34■□□□□ 0.37
LRRC38Q5VT99 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC17.34■□□□□ 0.37
LRRC38Q5VT99 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
LRRC38Q5VT99 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
LRRC38Q5VT99 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms