Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
RC3H1Q5TC82 AC092053.1-201ENST00000605787 1936 ntBASIC20.8■□□□□ 0.92
RC3H1Q5TC82 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RC3H1Q5TC82 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RC3H1Q5TC82 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
RC3H1Q5TC82 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RC3H1Q5TC82 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
RC3H1Q5TC82 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC20.79■□□□□ 0.92
RC3H1Q5TC82 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
RC3H1Q5TC82 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC20.79■□□□□ 0.92
RC3H1Q5TC82 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC20.79■□□□□ 0.92
RC3H1Q5TC82 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
RC3H1Q5TC82 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RC3H1Q5TC82 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RC3H1Q5TC82 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RC3H1Q5TC82 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
RC3H1Q5TC82 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC20.79■□□□□ 0.92
RC3H1Q5TC82 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RC3H1Q5TC82 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RC3H1Q5TC82 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC20.79■□□□□ 0.92
RC3H1Q5TC82 AL139010.1-201ENST00000454878 894 ntBASIC20.79■□□□□ 0.92
RC3H1Q5TC82 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
RC3H1Q5TC82 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC20.79■□□□□ 0.92
RC3H1Q5TC82 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RC3H1Q5TC82 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
RC3H1Q5TC82 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
RC3H1Q5TC82 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RC3H1Q5TC82 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC20.79■□□□□ 0.92
RC3H1Q5TC82 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RC3H1Q5TC82 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
RC3H1Q5TC82 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RC3H1Q5TC82 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC20.79■□□□□ 0.92
RC3H1Q5TC82 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RC3H1Q5TC82 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
RC3H1Q5TC82 AL512652.2-201ENST00000625156 1716 ntBASIC20.78■□□□□ 0.92
RC3H1Q5TC82 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RC3H1Q5TC82 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
RC3H1Q5TC82 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RC3H1Q5TC82 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC20.78■□□□□ 0.92
RC3H1Q5TC82 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
RC3H1Q5TC82 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RC3H1Q5TC82 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
RC3H1Q5TC82 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC20.78■□□□□ 0.92
RC3H1Q5TC82 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
RC3H1Q5TC82 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
RC3H1Q5TC82 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
RC3H1Q5TC82 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
RC3H1Q5TC82 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC20.78■□□□□ 0.92
RC3H1Q5TC82 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC20.78■□□□□ 0.92
RC3H1Q5TC82 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC20.78■□□□□ 0.92
RC3H1Q5TC82 ORC6-206ENST00000568364 888 ntTSL 5 BASIC20.78■□□□□ 0.92
RC3H1Q5TC82 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
RC3H1Q5TC82 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RC3H1Q5TC82 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
RC3H1Q5TC82 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
RC3H1Q5TC82 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RC3H1Q5TC82 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RC3H1Q5TC82 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RC3H1Q5TC82 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RC3H1Q5TC82 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RC3H1Q5TC82 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC20.77■□□□□ 0.92
RC3H1Q5TC82 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RC3H1Q5TC82 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC20.77■□□□□ 0.92
RC3H1Q5TC82 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RC3H1Q5TC82 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC20.77■□□□□ 0.92
RC3H1Q5TC82 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RC3H1Q5TC82 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RC3H1Q5TC82 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC20.77■□□□□ 0.92
RC3H1Q5TC82 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
RC3H1Q5TC82 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC20.77■□□□□ 0.92
RC3H1Q5TC82 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RC3H1Q5TC82 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.92
RC3H1Q5TC82 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC20.77■□□□□ 0.92
RC3H1Q5TC82 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RC3H1Q5TC82 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.92
RC3H1Q5TC82 RAD18-204ENST00000418463 563 ntTSL 4 BASIC20.77■□□□□ 0.92
RC3H1Q5TC82 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC20.77■□□□□ 0.92
RC3H1Q5TC82 HIST1H2BPS3-201ENST00000419683 341 ntBASIC20.77■□□□□ 0.92
RC3H1Q5TC82 RAD18-205ENST00000421052 582 ntTSL 3 BASIC20.77■□□□□ 0.92
RC3H1Q5TC82 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC20.77■□□□□ 0.92
RC3H1Q5TC82 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC20.77■□□□□ 0.92
RC3H1Q5TC82 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC20.77■□□□□ 0.92
RC3H1Q5TC82 NOP2-211ENST00000540228 668 ntTSL 2 BASIC20.77■□□□□ 0.92
RC3H1Q5TC82 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RC3H1Q5TC82 MIR6775-201ENST00000617557 69 ntBASIC20.77■□□□□ 0.92
RC3H1Q5TC82 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RC3H1Q5TC82 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RC3H1Q5TC82 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RC3H1Q5TC82 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RC3H1Q5TC82 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
RC3H1Q5TC82 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RC3H1Q5TC82 GATB-213ENST00000515812 1893 ntTSL 5 BASIC20.77■□□□□ 0.92
RC3H1Q5TC82 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.91
RC3H1Q5TC82 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
RC3H1Q5TC82 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
RC3H1Q5TC82 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
RC3H1Q5TC82 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RC3H1Q5TC82 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RC3H1Q5TC82 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
RC3H1Q5TC82 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms