Protein–RNA interactions for Protein: Q5SW96

LDLRAP1, Low density lipoprotein receptor adapter protein 1, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1Q5SW96 WDR88-203ENST00000592765 651 ntTSL 5 BASIC16.7■□□□□ 0.26
LDLRAP1Q5SW96 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC16.7■□□□□ 0.26
LDLRAP1Q5SW96 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC16.7■□□□□ 0.26
LDLRAP1Q5SW96 AL645728.2-201ENST00000641974 660 ntBASIC16.7■□□□□ 0.26
LDLRAP1Q5SW96 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
LDLRAP1Q5SW96 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LDLRAP1Q5SW96 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
LDLRAP1Q5SW96 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LDLRAP1Q5SW96 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LDLRAP1Q5SW96 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC16.7■□□□□ 0.26
LDLRAP1Q5SW96 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LDLRAP1Q5SW96 AC131009.4-201ENST00000624048 1740 ntBASIC16.7■□□□□ 0.26
LDLRAP1Q5SW96 PCDHB17P-201ENST00000539533 2393 ntBASIC16.7■□□□□ 0.26
LDLRAP1Q5SW96 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
LDLRAP1Q5SW96 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LDLRAP1Q5SW96 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC16.7■□□□□ 0.26
LDLRAP1Q5SW96 PMS2P7-201ENST00000506558 1336 ntBASIC16.7■□□□□ 0.26
LDLRAP1Q5SW96 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LDLRAP1Q5SW96 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
LDLRAP1Q5SW96 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LDLRAP1Q5SW96 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LDLRAP1Q5SW96 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
LDLRAP1Q5SW96 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LDLRAP1Q5SW96 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LDLRAP1Q5SW96 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LDLRAP1Q5SW96 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC16.69■□□□□ 0.26
LDLRAP1Q5SW96 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC16.69■□□□□ 0.26
LDLRAP1Q5SW96 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC16.69■□□□□ 0.26
LDLRAP1Q5SW96 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
LDLRAP1Q5SW96 PC-214ENST00000628663 1470 ntTSL 5 BASIC16.69■□□□□ 0.26
LDLRAP1Q5SW96 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
LDLRAP1Q5SW96 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.69■□□□□ 0.26
LDLRAP1Q5SW96 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LDLRAP1Q5SW96 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC16.69■□□□□ 0.26
LDLRAP1Q5SW96 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
LDLRAP1Q5SW96 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
LDLRAP1Q5SW96 AC087641.1-201ENST00000557561 1021 ntBASIC16.69■□□□□ 0.26
LDLRAP1Q5SW96 AC018845.2-201ENST00000568326 409 ntBASIC16.69■□□□□ 0.26
LDLRAP1Q5SW96 MIR4515-201ENST00000584082 81 ntBASIC16.69■□□□□ 0.26
LDLRAP1Q5SW96 AL671883.3-201ENST00000603274 991 ntBASIC16.69■□□□□ 0.26
LDLRAP1Q5SW96 AC013467.2-201ENST00000605472 835 ntBASIC16.69■□□□□ 0.26
LDLRAP1Q5SW96 AQP6-205ENST00000618286 829 ntTSL 5 BASIC16.69■□□□□ 0.26
LDLRAP1Q5SW96 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LDLRAP1Q5SW96 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
LDLRAP1Q5SW96 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LDLRAP1Q5SW96 LINC00895-201ENST00000629028 1637 ntBASIC16.69■□□□□ 0.26
LDLRAP1Q5SW96 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LDLRAP1Q5SW96 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LDLRAP1Q5SW96 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
LDLRAP1Q5SW96 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LDLRAP1Q5SW96 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LDLRAP1Q5SW96 BCAR1-209ENST00000546196 1340 ntBASIC16.69■□□□□ 0.26
LDLRAP1Q5SW96 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LDLRAP1Q5SW96 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
LDLRAP1Q5SW96 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.69■□□□□ 0.26
LDLRAP1Q5SW96 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LDLRAP1Q5SW96 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LDLRAP1Q5SW96 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
LDLRAP1Q5SW96 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
LDLRAP1Q5SW96 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC16.68■□□□□ 0.26
LDLRAP1Q5SW96 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
LDLRAP1Q5SW96 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC16.68■□□□□ 0.26
LDLRAP1Q5SW96 AC040169.1-201ENST00000565382 521 ntBASIC16.68■□□□□ 0.26
LDLRAP1Q5SW96 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
LDLRAP1Q5SW96 AC004877.2-201ENST00000623941 599 ntBASIC16.68■□□□□ 0.26
LDLRAP1Q5SW96 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC16.68■□□□□ 0.26
LDLRAP1Q5SW96 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC16.68■□□□□ 0.26
LDLRAP1Q5SW96 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC16.68■□□□□ 0.26
LDLRAP1Q5SW96 AC012569.1-201ENST00000591191 1524 ntBASIC16.68■□□□□ 0.26
LDLRAP1Q5SW96 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LDLRAP1Q5SW96 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LDLRAP1Q5SW96 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LDLRAP1Q5SW96 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LDLRAP1Q5SW96 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
LDLRAP1Q5SW96 AC105020.1-201ENST00000435356 2205 ntBASIC16.68■□□□□ 0.26
LDLRAP1Q5SW96 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
LDLRAP1Q5SW96 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC16.67■□□□□ 0.26
LDLRAP1Q5SW96 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
LDLRAP1Q5SW96 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LDLRAP1Q5SW96 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
LDLRAP1Q5SW96 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LDLRAP1Q5SW96 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
LDLRAP1Q5SW96 AC006277.1-201ENST00000624348 1610 ntBASIC16.67■□□□□ 0.26
LDLRAP1Q5SW96 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
LDLRAP1Q5SW96 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC16.67■□□□□ 0.26
LDLRAP1Q5SW96 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC16.67■□□□□ 0.26
LDLRAP1Q5SW96 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
LDLRAP1Q5SW96 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC16.67■□□□□ 0.26
LDLRAP1Q5SW96 SLC22A20-204ENST00000530038 1673 ntBASIC16.67■□□□□ 0.26
LDLRAP1Q5SW96 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LDLRAP1Q5SW96 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LDLRAP1Q5SW96 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC16.67■□□□□ 0.26
LDLRAP1Q5SW96 NMU-202ENST00000505262 693 ntTSL 3 BASIC16.67■□□□□ 0.26
LDLRAP1Q5SW96 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC16.67■□□□□ 0.26
LDLRAP1Q5SW96 AL031432.2-201ENST00000566714 459 ntBASIC16.67■□□□□ 0.26
LDLRAP1Q5SW96 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC16.67■□□□□ 0.26
LDLRAP1Q5SW96 AL928711.1-201ENST00000570165 459 ntBASIC16.67■□□□□ 0.26
LDLRAP1Q5SW96 MIR4492-201ENST00000581627 80 ntBASIC16.67■□□□□ 0.26
LDLRAP1Q5SW96 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LDLRAP1Q5SW96 PCDHB19P-201ENST00000570871 2371 ntBASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms