Protein–RNA interactions for Protein: Q2M329

CCDC96, Coiled-coil domain-containing protein 96, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC96Q2M329 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
CCDC96Q2M329 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC19.47■□□□□ 0.71
CCDC96Q2M329 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC96Q2M329 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC96Q2M329 PMS2P4-201ENST00000412466 1052 ntBASIC19.47■□□□□ 0.71
CCDC96Q2M329 AC092474.2-201ENST00000424288 719 ntBASIC19.47■□□□□ 0.71
CCDC96Q2M329 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC96Q2M329 AL592309.1-201ENST00000443127 649 ntBASIC19.47■□□□□ 0.71
CCDC96Q2M329 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC19.47■□□□□ 0.71
CCDC96Q2M329 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC96Q2M329 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC19.47■□□□□ 0.71
CCDC96Q2M329 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
CCDC96Q2M329 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
CCDC96Q2M329 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC19.47■□□□□ 0.71
CCDC96Q2M329 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC19.47■□□□□ 0.71
CCDC96Q2M329 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC96Q2M329 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC19.47■□□□□ 0.71
CCDC96Q2M329 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC96Q2M329 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC96Q2M329 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC19.47■□□□□ 0.71
CCDC96Q2M329 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
CCDC96Q2M329 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC96Q2M329 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC96Q2M329 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC96Q2M329 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC96Q2M329 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC96Q2M329 AKAP8P1-201ENST00000434743 1349 ntBASIC19.47■□□□□ 0.71
CCDC96Q2M329 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC96Q2M329 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC96Q2M329 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC96Q2M329 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC19.46■□□□□ 0.71
CCDC96Q2M329 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC96Q2M329 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC96Q2M329 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC96Q2M329 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC96Q2M329 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC96Q2M329 WASH6P-202ENST00000359512 1437 ntBASIC19.46■□□□□ 0.71
CCDC96Q2M329 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC96Q2M329 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC96Q2M329 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC96Q2M329 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC96Q2M329 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC96Q2M329 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC19.46■□□□□ 0.71
CCDC96Q2M329 AC023141.5-201ENST00000458585 616 ntBASIC19.46■□□□□ 0.71
CCDC96Q2M329 AC243562.1-201ENST00000560672 389 ntBASIC19.46■□□□□ 0.71
CCDC96Q2M329 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC19.46■□□□□ 0.71
CCDC96Q2M329 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
CCDC96Q2M329 RPS15-207ENST00000591032 550 ntTSL 3 BASIC19.46■□□□□ 0.71
CCDC96Q2M329 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC96Q2M329 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC96Q2M329 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC96Q2M329 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC96Q2M329 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC19.46■□□□□ 0.71
CCDC96Q2M329 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC19.46■□□□□ 0.71
CCDC96Q2M329 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC96Q2M329 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC96Q2M329 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC19.46■□□□□ 0.71
CCDC96Q2M329 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC96Q2M329 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC96Q2M329 AC016027.1-202ENST00000607927 1699 ntBASIC19.46■□□□□ 0.71
CCDC96Q2M329 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC96Q2M329 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC96Q2M329 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC19.45■□□□□ 0.7
CCDC96Q2M329 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC96Q2M329 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC96Q2M329 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC96Q2M329 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC19.45■□□□□ 0.7
CCDC96Q2M329 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC19.45■□□□□ 0.7
CCDC96Q2M329 CROCCP1-201ENST00000426910 5675 ntBASIC19.45■□□□□ 0.7
CCDC96Q2M329 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC96Q2M329 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
CCDC96Q2M329 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC96Q2M329 AC006277.1-201ENST00000624348 1610 ntBASIC19.45■□□□□ 0.7
CCDC96Q2M329 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC96Q2M329 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC96Q2M329 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC96Q2M329 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC19.45■□□□□ 0.7
CCDC96Q2M329 AL627223.1-201ENST00000416693 442 ntBASIC19.45■□□□□ 0.7
CCDC96Q2M329 PON3-203ENST00000427422 894 ntTSL 3 BASIC19.45■□□□□ 0.7
CCDC96Q2M329 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC19.45■□□□□ 0.7
CCDC96Q2M329 RNF34-208ENST00000555076 593 ntTSL 3 BASIC19.45■□□□□ 0.7
CCDC96Q2M329 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC19.45■□□□□ 0.7
CCDC96Q2M329 AC027796.2-201ENST00000575326 344 ntBASIC19.45■□□□□ 0.7
CCDC96Q2M329 MIR3909-201ENST00000579518 119 ntBASIC19.45■□□□□ 0.7
CCDC96Q2M329 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC19.45■□□□□ 0.7
CCDC96Q2M329 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC96Q2M329 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC19.45■□□□□ 0.7
CCDC96Q2M329 AC093028.1-201ENST00000622998 982 ntBASIC19.45■□□□□ 0.7
CCDC96Q2M329 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC19.45■□□□□ 0.7
CCDC96Q2M329 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC96Q2M329 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC19.45■□□□□ 0.7
CCDC96Q2M329 AC099398.1-201ENST00000567919 2776 ntBASIC19.45■□□□□ 0.7
CCDC96Q2M329 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC96Q2M329 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC96Q2M329 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC96Q2M329 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC96Q2M329 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC96Q2M329 BSG-215ENST00000618006 1329 ntTSL 2 BASIC19.45■□□□□ 0.7
CCDC96Q2M329 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC96Q2M329 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms