Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC14.53□□□□□ -0.08
UBA52P62987 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC14.53□□□□□ -0.08
UBA52P62987 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
UBA52P62987 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC14.53□□□□□ -0.08
UBA52P62987 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
UBA52P62987 AC243591.1-201ENST00000452967 1364 ntBASIC14.53□□□□□ -0.08
UBA52P62987 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
UBA52P62987 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC14.53□□□□□ -0.08
UBA52P62987 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
UBA52P62987 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC14.53□□□□□ -0.08
UBA52P62987 AC106730.1-201ENST00000566722 1090 ntBASIC14.53□□□□□ -0.08
UBA52P62987 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC14.53□□□□□ -0.08
UBA52P62987 NORAD-201ENST00000565493 5339 ntBASIC14.53□□□□□ -0.08
UBA52P62987 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
UBA52P62987 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
UBA52P62987 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
UBA52P62987 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
UBA52P62987 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
UBA52P62987 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
UBA52P62987 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
UBA52P62987 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
UBA52P62987 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
UBA52P62987 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
UBA52P62987 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
UBA52P62987 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
UBA52P62987 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC14.52□□□□□ -0.08
UBA52P62987 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
UBA52P62987 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
UBA52P62987 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.08
UBA52P62987 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
UBA52P62987 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
UBA52P62987 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
UBA52P62987 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
UBA52P62987 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
UBA52P62987 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
UBA52P62987 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC14.52□□□□□ -0.08
UBA52P62987 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
UBA52P62987 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.08
UBA52P62987 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
UBA52P62987 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
UBA52P62987 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
UBA52P62987 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
UBA52P62987 MIR1233-2-201ENST00000408138 82 ntBASIC14.52□□□□□ -0.09
UBA52P62987 MIR1233-1-201ENST00000408722 82 ntBASIC14.52□□□□□ -0.09
UBA52P62987 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
UBA52P62987 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC14.52□□□□□ -0.09
UBA52P62987 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
UBA52P62987 AC018712.1-201ENST00000455767 687 ntBASIC14.52□□□□□ -0.09
UBA52P62987 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC14.52□□□□□ -0.09
UBA52P62987 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC14.52□□□□□ -0.09
UBA52P62987 COX5A-204ENST00000567270 579 ntTSL 3 BASIC14.52□□□□□ -0.09
UBA52P62987 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC14.52□□□□□ -0.09
UBA52P62987 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.09
UBA52P62987 AL355877.3-201ENST00000622820 899 ntBASIC14.52□□□□□ -0.09
UBA52P62987 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
UBA52P62987 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC14.52□□□□□ -0.09
UBA52P62987 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
UBA52P62987 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
UBA52P62987 AC126755.1-201ENST00000525846 6405 ntBASIC14.52□□□□□ -0.09
UBA52P62987 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC14.52□□□□□ -0.09
UBA52P62987 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
UBA52P62987 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
UBA52P62987 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
UBA52P62987 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
UBA52P62987 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
UBA52P62987 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC14.51□□□□□ -0.09
UBA52P62987 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC14.51□□□□□ -0.09
UBA52P62987 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
UBA52P62987 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC14.51□□□□□ -0.09
UBA52P62987 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
UBA52P62987 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC14.51□□□□□ -0.09
UBA52P62987 AC016396.2-201ENST00000562575 1417 ntBASIC14.51□□□□□ -0.09
UBA52P62987 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
UBA52P62987 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC14.51□□□□□ -0.09
UBA52P62987 AC092384.3-202ENST00000564646 2873 ntBASIC14.51□□□□□ -0.09
UBA52P62987 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
UBA52P62987 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
UBA52P62987 CCS-201ENST00000310190 942 ntTSL 5 BASIC14.51□□□□□ -0.09
UBA52P62987 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
UBA52P62987 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
UBA52P62987 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC14.51□□□□□ -0.09
UBA52P62987 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC14.51□□□□□ -0.09
UBA52P62987 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC14.51□□□□□ -0.09
UBA52P62987 RCN1P2-201ENST00000398357 915 ntBASIC14.51□□□□□ -0.09
UBA52P62987 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC14.51□□□□□ -0.09
UBA52P62987 AC113404.2-201ENST00000507884 177 ntBASIC14.51□□□□□ -0.09
UBA52P62987 POLD2P1-201ENST00000511220 997 ntBASIC14.51□□□□□ -0.09
UBA52P62987 AC139887.3-201ENST00000568585 713 ntBASIC14.51□□□□□ -0.09
UBA52P62987 LITAF-211ENST00000572255 516 ntTSL 4 BASIC14.51□□□□□ -0.09
UBA52P62987 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
UBA52P62987 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC14.51□□□□□ -0.09
UBA52P62987 TERC-201ENST00000602385 541 ntBASIC14.51□□□□□ -0.09
UBA52P62987 PRKN-208ENST00000610470 531 ntTSL 2 BASIC14.51□□□□□ -0.09
UBA52P62987 PRKN-209ENST00000612485 225 ntTSL 5 BASIC14.51□□□□□ -0.09
UBA52P62987 MIR7706-201ENST00000613747 67 ntBASIC14.51□□□□□ -0.09
UBA52P62987 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC14.51□□□□□ -0.09
UBA52P62987 LINC01451-201ENST00000623792 534 ntBASIC14.51□□□□□ -0.09
UBA52P62987 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
UBA52P62987 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
UBA52P62987 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms