Protein–RNA interactions for Protein: P57682

KLF3, Krueppel-like factor 3, humanhuman

Predicted RBP Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLF3P57682 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
KLF3P57682 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
KLF3P57682 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
KLF3P57682 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
KLF3P57682 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
KLF3P57682 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
KLF3P57682 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
KLF3P57682 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
KLF3P57682 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
KLF3P57682 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
KLF3P57682 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
KLF3P57682 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
KLF3P57682 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
KLF3P57682 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
KLF3P57682 FER1L4-210ENST00000615531 5998 ntBASIC14.38□□□□□ -0.11
KLF3P57682 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
KLF3P57682 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
KLF3P57682 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
KLF3P57682 AC002056.1-201ENST00000395613 760 ntBASIC14.38□□□□□ -0.11
KLF3P57682 HMGA1P7-201ENST00000406908 502 ntBASIC14.38□□□□□ -0.11
KLF3P57682 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC14.38□□□□□ -0.11
KLF3P57682 MIR1233-2-201ENST00000408138 82 ntBASIC14.38□□□□□ -0.11
KLF3P57682 MIR1233-1-201ENST00000408722 82 ntBASIC14.38□□□□□ -0.11
KLF3P57682 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC14.38□□□□□ -0.11
KLF3P57682 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
KLF3P57682 AC140658.5-201ENST00000438532 169 ntBASIC14.38□□□□□ -0.11
KLF3P57682 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
KLF3P57682 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
KLF3P57682 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
KLF3P57682 THTPA-204ENST00000554970 569 ntTSL 4 BASIC14.38□□□□□ -0.11
KLF3P57682 THTPA-206ENST00000556015 535 ntTSL 3 BASIC14.38□□□□□ -0.11
KLF3P57682 AC005829.1-201ENST00000570002 483 ntBASIC14.38□□□□□ -0.11
KLF3P57682 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC14.38□□□□□ -0.11
KLF3P57682 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
KLF3P57682 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
KLF3P57682 AL078644.1-201ENST00000609881 752 ntBASIC14.38□□□□□ -0.11
KLF3P57682 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC14.38□□□□□ -0.11
KLF3P57682 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
KLF3P57682 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
KLF3P57682 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
KLF3P57682 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
KLF3P57682 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC14.38□□□□□ -0.11
KLF3P57682 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC14.38□□□□□ -0.11
KLF3P57682 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
KLF3P57682 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
KLF3P57682 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
KLF3P57682 AC006277.1-201ENST00000624348 1610 ntBASIC14.37□□□□□ -0.11
KLF3P57682 LINC00895-201ENST00000629028 1637 ntBASIC14.37□□□□□ -0.11
KLF3P57682 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
KLF3P57682 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
KLF3P57682 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC14.37□□□□□ -0.11
KLF3P57682 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
KLF3P57682 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
KLF3P57682 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
KLF3P57682 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
KLF3P57682 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
KLF3P57682 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
KLF3P57682 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
KLF3P57682 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
KLF3P57682 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
KLF3P57682 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
KLF3P57682 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
KLF3P57682 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC14.37□□□□□ -0.11
KLF3P57682 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC14.37□□□□□ -0.11
KLF3P57682 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
KLF3P57682 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
KLF3P57682 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
KLF3P57682 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
KLF3P57682 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
KLF3P57682 RPSAP43-201ENST00000402237 625 ntBASIC14.37□□□□□ -0.11
KLF3P57682 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC14.37□□□□□ -0.11
KLF3P57682 COA5-202ENST00000409997 557 ntTSL 4 BASIC14.37□□□□□ -0.11
KLF3P57682 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC14.37□□□□□ -0.11
KLF3P57682 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC14.37□□□□□ -0.11
KLF3P57682 FAM58CP-201ENST00000435741 640 ntBASIC14.37□□□□□ -0.11
KLF3P57682 MKNK2P1-201ENST00000437526 628 ntBASIC14.37□□□□□ -0.11
KLF3P57682 FIS1-203ENST00000442303 631 ntTSL 3 BASIC14.37□□□□□ -0.11
KLF3P57682 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
KLF3P57682 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC14.37□□□□□ -0.11
KLF3P57682 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC14.37□□□□□ -0.11
KLF3P57682 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
KLF3P57682 MIR4492-201ENST00000581627 80 ntBASIC14.37□□□□□ -0.11
KLF3P57682 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC14.37□□□□□ -0.11
KLF3P57682 AC013467.2-201ENST00000605472 835 ntBASIC14.37□□□□□ -0.11
KLF3P57682 AC091812.2-201ENST00000619081 385 ntBASIC14.37□□□□□ -0.11
KLF3P57682 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC14.37□□□□□ -0.11
KLF3P57682 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
KLF3P57682 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC14.37□□□□□ -0.11
KLF3P57682 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
KLF3P57682 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
KLF3P57682 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
KLF3P57682 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
KLF3P57682 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
KLF3P57682 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
KLF3P57682 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
KLF3P57682 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC14.37□□□□□ -0.11
KLF3P57682 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC14.37□□□□□ -0.11
KLF3P57682 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
KLF3P57682 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
KLF3P57682 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms