Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PER3P56645 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PER3P56645 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PER3P56645 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
PER3P56645 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PER3P56645 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
PER3P56645 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC15.57■□□□□ 0.08
PER3P56645 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PER3P56645 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
PER3P56645 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
PER3P56645 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
PER3P56645 AC132938.5-201ENST00000624980 1813 ntBASIC15.57■□□□□ 0.08
PER3P56645 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PER3P56645 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
PER3P56645 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC15.57■□□□□ 0.08
PER3P56645 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC15.57■□□□□ 0.08
PER3P56645 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC15.57■□□□□ 0.08
PER3P56645 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PER3P56645 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
PER3P56645 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
PER3P56645 MYCLP1-201ENST00000372451 1075 ntBASIC15.57■□□□□ 0.08
PER3P56645 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
PER3P56645 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PER3P56645 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC15.57■□□□□ 0.08
PER3P56645 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC15.57■□□□□ 0.08
PER3P56645 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PER3P56645 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC15.57■□□□□ 0.08
PER3P56645 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC15.57■□□□□ 0.08
PER3P56645 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC15.57■□□□□ 0.08
PER3P56645 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC15.57■□□□□ 0.08
PER3P56645 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC15.57■□□□□ 0.08
PER3P56645 AC004877.2-201ENST00000623941 599 ntBASIC15.57■□□□□ 0.08
PER3P56645 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PER3P56645 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
PER3P56645 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PER3P56645 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PER3P56645 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
PER3P56645 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC15.57■□□□□ 0.08
PER3P56645 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PER3P56645 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC15.57■□□□□ 0.08
PER3P56645 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
PER3P56645 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC15.57■□□□□ 0.08
PER3P56645 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
PER3P56645 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PER3P56645 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
PER3P56645 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
PER3P56645 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PER3P56645 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PER3P56645 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC15.57■□□□□ 0.08
PER3P56645 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
PER3P56645 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC15.57■□□□□ 0.08
PER3P56645 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC15.56■□□□□ 0.08
PER3P56645 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC15.56■□□□□ 0.08
PER3P56645 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PER3P56645 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PER3P56645 BOC-212ENST00000485230 2173 ntTSL 2 BASIC15.56■□□□□ 0.08
PER3P56645 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
PER3P56645 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
PER3P56645 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PER3P56645 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
PER3P56645 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC15.56■□□□□ 0.08
PER3P56645 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PER3P56645 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC15.56■□□□□ 0.08
PER3P56645 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PER3P56645 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC15.56■□□□□ 0.08
PER3P56645 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC15.56■□□□□ 0.08
PER3P56645 BCRP1-201ENST00000444246 691 ntBASIC15.56■□□□□ 0.08
PER3P56645 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC15.56■□□□□ 0.08
PER3P56645 AC074386.1-202ENST00000463561 864 ntBASIC15.56■□□□□ 0.08
PER3P56645 HLA-J-203ENST00000494367 1087 ntBASIC15.56■□□□□ 0.08
PER3P56645 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC15.56■□□□□ 0.08
PER3P56645 AL031432.2-201ENST00000566714 459 ntBASIC15.56■□□□□ 0.08
PER3P56645 AL928711.1-201ENST00000570165 459 ntBASIC15.56■□□□□ 0.08
PER3P56645 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC15.56■□□□□ 0.08
PER3P56645 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC15.56■□□□□ 0.08
PER3P56645 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PER3P56645 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PER3P56645 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PER3P56645 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC15.56■□□□□ 0.08
PER3P56645 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PER3P56645 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC15.56■□□□□ 0.08
PER3P56645 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC15.56■□□□□ 0.08
PER3P56645 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
PER3P56645 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PER3P56645 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
PER3P56645 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
PER3P56645 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PER3P56645 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC15.56■□□□□ 0.08
PER3P56645 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC15.56■□□□□ 0.08
PER3P56645 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PER3P56645 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PER3P56645 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
PER3P56645 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PER3P56645 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
PER3P56645 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PER3P56645 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PER3P56645 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC15.55■□□□□ 0.08
PER3P56645 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC15.55■□□□□ 0.08
PER3P56645 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PER3P56645 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms