Protein–RNA interactions for Protein: P56377

AP1S2, AP-1 complex subunit sigma-2, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S2P56377 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16.3■□□□□ 0.2
AP1S2P56377 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
AP1S2P56377 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
AP1S2P56377 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
AP1S2P56377 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC16.3■□□□□ 0.2
AP1S2P56377 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
AP1S2P56377 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
AP1S2P56377 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
AP1S2P56377 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
AP1S2P56377 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
AP1S2P56377 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
AP1S2P56377 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
AP1S2P56377 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC16.3■□□□□ 0.2
AP1S2P56377 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
AP1S2P56377 AL645728.2-201ENST00000641974 660 ntBASIC16.3■□□□□ 0.2
AP1S2P56377 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
AP1S2P56377 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
AP1S2P56377 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
AP1S2P56377 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
AP1S2P56377 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
AP1S2P56377 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.3■□□□□ 0.2
AP1S2P56377 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC16.3■□□□□ 0.2
AP1S2P56377 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
AP1S2P56377 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
AP1S2P56377 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
AP1S2P56377 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC16.3■□□□□ 0.2
AP1S2P56377 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
AP1S2P56377 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
AP1S2P56377 GCK-202ENST00000345378 2421 ntTSL 2 BASIC16.29■□□□□ 0.2
AP1S2P56377 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
AP1S2P56377 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
AP1S2P56377 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC16.29■□□□□ 0.2
AP1S2P56377 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
AP1S2P56377 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
AP1S2P56377 AL671710.1-201ENST00000610245 2349 ntBASIC16.29■□□□□ 0.2
AP1S2P56377 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
AP1S2P56377 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
AP1S2P56377 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
AP1S2P56377 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
AP1S2P56377 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC16.29■□□□□ 0.2
AP1S2P56377 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
AP1S2P56377 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
AP1S2P56377 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC16.29■□□□□ 0.2
AP1S2P56377 MTRF1LP2-201ENST00000506027 1122 ntBASIC16.29■□□□□ 0.2
AP1S2P56377 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC16.29■□□□□ 0.2
AP1S2P56377 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC16.29■□□□□ 0.2
AP1S2P56377 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC16.29■□□□□ 0.2
AP1S2P56377 AC145285.3-201ENST00000564603 959 ntBASIC16.29■□□□□ 0.2
AP1S2P56377 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
AP1S2P56377 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC16.29■□□□□ 0.2
AP1S2P56377 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC16.29■□□□□ 0.2
AP1S2P56377 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
AP1S2P56377 GGT3P-204ENST00000453783 1664 ntBASIC16.29■□□□□ 0.2
AP1S2P56377 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
AP1S2P56377 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
AP1S2P56377 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
AP1S2P56377 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
AP1S2P56377 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
AP1S2P56377 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
AP1S2P56377 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
AP1S2P56377 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
AP1S2P56377 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC16.29■□□□□ 0.2
AP1S2P56377 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
AP1S2P56377 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.29■□□□□ 0.2
AP1S2P56377 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
AP1S2P56377 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
AP1S2P56377 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
AP1S2P56377 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16.28■□□□□ 0.2
AP1S2P56377 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
AP1S2P56377 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
AP1S2P56377 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC16.28■□□□□ 0.2
AP1S2P56377 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC16.28■□□□□ 0.2
AP1S2P56377 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
AP1S2P56377 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
AP1S2P56377 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC16.28■□□□□ 0.2
AP1S2P56377 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
AP1S2P56377 SLC9A3P2-201ENST00000447821 2021 ntBASIC16.28■□□□□ 0.2
AP1S2P56377 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
AP1S2P56377 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
AP1S2P56377 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
AP1S2P56377 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
AP1S2P56377 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC16.28■□□□□ 0.2
AP1S2P56377 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.28■□□□□ 0.2
AP1S2P56377 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
AP1S2P56377 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
AP1S2P56377 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
AP1S2P56377 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
AP1S2P56377 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC16.28■□□□□ 0.2
AP1S2P56377 HCG4B-203ENST00000450128 991 ntBASIC16.28■□□□□ 0.2
AP1S2P56377 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC16.28■□□□□ 0.2
AP1S2P56377 POLD4-207ENST00000531239 584 ntTSL 2 BASIC16.28■□□□□ 0.2
AP1S2P56377 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC16.28■□□□□ 0.2
AP1S2P56377 KLK8-205ENST00000593490 267 ntTSL 3 BASIC16.28■□□□□ 0.2
AP1S2P56377 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC16.28■□□□□ 0.2
AP1S2P56377 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC16.28■□□□□ 0.2
AP1S2P56377 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
AP1S2P56377 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC16.28■□□□□ 0.2
AP1S2P56377 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.28■□□□□ 0.2
AP1S2P56377 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
AP1S2P56377 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms