Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
CDH11P55287 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDH11P55287 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDH11P55287 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC15.4■□□□□ 0.06
CDH11P55287 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC15.4■□□□□ 0.06
CDH11P55287 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDH11P55287 FAM220CP-201ENST00000395253 831 ntBASIC15.4■□□□□ 0.06
CDH11P55287 AL022342.1-201ENST00000400363 863 ntBASIC15.4■□□□□ 0.06
CDH11P55287 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC15.4■□□□□ 0.06
CDH11P55287 RBM17P3-201ENST00000417687 1192 ntBASIC15.4■□□□□ 0.06
CDH11P55287 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC15.4■□□□□ 0.06
CDH11P55287 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC15.4■□□□□ 0.06
CDH11P55287 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDH11P55287 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
CDH11P55287 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC15.4■□□□□ 0.06
CDH11P55287 AF186996.4-201ENST00000467186 377 ntBASIC15.4■□□□□ 0.06
CDH11P55287 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC15.4■□□□□ 0.06
CDH11P55287 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CDH11P55287 STK19B-204ENST00000512515 211 ntBASIC15.4■□□□□ 0.06
CDH11P55287 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
CDH11P55287 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC15.4■□□□□ 0.06
CDH11P55287 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC15.4■□□□□ 0.06
CDH11P55287 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC15.4■□□□□ 0.06
CDH11P55287 AL773604.1-201ENST00000617417 272 ntBASIC15.4■□□□□ 0.06
CDH11P55287 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC15.4■□□□□ 0.06
CDH11P55287 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CDH11P55287 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDH11P55287 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDH11P55287 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
CDH11P55287 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC15.4■□□□□ 0.06
CDH11P55287 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CDH11P55287 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC15.4■□□□□ 0.06
CDH11P55287 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC15.4■□□□□ 0.06
CDH11P55287 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CDH11P55287 PGR-209ENST00000617858 2816 ntTSL 5 BASIC15.39■□□□□ 0.06
CDH11P55287 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC15.39■□□□□ 0.05
CDH11P55287 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CDH11P55287 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC15.39■□□□□ 0.05
CDH11P55287 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDH11P55287 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CDH11P55287 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC15.39■□□□□ 0.05
CDH11P55287 INTS4P1-201ENST00000438455 1935 ntBASIC15.39■□□□□ 0.05
CDH11P55287 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDH11P55287 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
CDH11P55287 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
CDH11P55287 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CDH11P55287 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
CDH11P55287 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC15.39■□□□□ 0.05
CDH11P55287 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDH11P55287 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDH11P55287 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDH11P55287 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC15.39■□□□□ 0.05
CDH11P55287 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CDH11P55287 FUOM-202ENST00000368551 628 ntTSL 3 BASIC15.39■□□□□ 0.05
CDH11P55287 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC15.39■□□□□ 0.05
CDH11P55287 HIST2H3DP1-201ENST00000401004 416 ntBASIC15.39■□□□□ 0.05
CDH11P55287 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC15.39■□□□□ 0.05
CDH11P55287 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC15.39■□□□□ 0.05
CDH11P55287 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.05
CDH11P55287 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC15.39■□□□□ 0.05
CDH11P55287 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC15.39■□□□□ 0.05
CDH11P55287 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
CDH11P55287 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC15.39■□□□□ 0.05
CDH11P55287 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC15.39■□□□□ 0.05
CDH11P55287 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC15.39■□□□□ 0.05
CDH11P55287 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CDH11P55287 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC15.39■□□□□ 0.05
CDH11P55287 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
CDH11P55287 AC009336.1-201ENST00000608941 1553 ntBASIC15.39■□□□□ 0.05
CDH11P55287 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC15.39■□□□□ 0.05
CDH11P55287 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC15.39■□□□□ 0.05
CDH11P55287 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDH11P55287 AC007950.2-201ENST00000615045 2347 ntBASIC15.39■□□□□ 0.05
CDH11P55287 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC15.39■□□□□ 0.05
CDH11P55287 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC15.39■□□□□ 0.05
CDH11P55287 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
CDH11P55287 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
CDH11P55287 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDH11P55287 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
CDH11P55287 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDH11P55287 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
CDH11P55287 TUBB8P12-201ENST00000308911 1335 ntBASIC15.39■□□□□ 0.05
CDH11P55287 TUBB7P-202ENST00000428444 1305 ntBASIC15.39■□□□□ 0.05
CDH11P55287 TUBB8P7-204ENST00000567960 1332 ntBASIC15.39■□□□□ 0.05
CDH11P55287 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC15.39■□□□□ 0.05
CDH11P55287 AL645728.1-201ENST00000366221 2101 ntBASIC15.38■□□□□ 0.05
CDH11P55287 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CDH11P55287 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CDH11P55287 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CDH11P55287 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CDH11P55287 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC15.38■□□□□ 0.05
CDH11P55287 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC15.38■□□□□ 0.05
CDH11P55287 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CDH11P55287 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC15.38■□□□□ 0.05
CDH11P55287 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
CDH11P55287 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CDH11P55287 MED16-201ENST00000269814 1199 ntTSL 5 BASIC15.38■□□□□ 0.05
CDH11P55287 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CDH11P55287 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
CDH11P55287 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms