Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
LBX1P52954 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
LBX1P52954 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
LBX1P52954 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
LBX1P52954 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
LBX1P52954 ORMDL1-204ENST00000409519 1223 ntTSL 3 BASIC18.58■□□□□ 0.56
LBX1P52954 CYP46A4P-201ENST00000414953 267 ntBASIC18.58■□□□□ 0.56
LBX1P52954 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC18.58■□□□□ 0.56
LBX1P52954 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC18.58■□□□□ 0.56
LBX1P52954 AC012441.1-201ENST00000446669 685 ntBASIC18.58■□□□□ 0.56
LBX1P52954 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC18.58■□□□□ 0.56
LBX1P52954 AC009486.1-201ENST00000569860 813 ntBASIC18.58■□□□□ 0.56
LBX1P52954 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC18.58■□□□□ 0.56
LBX1P52954 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
LBX1P52954 BRI3BPP1-201ENST00000594224 787 ntBASIC18.58■□□□□ 0.56
LBX1P52954 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
LBX1P52954 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
LBX1P52954 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
LBX1P52954 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
LBX1P52954 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
LBX1P52954 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC18.58■□□□□ 0.56
LBX1P52954 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC18.58■□□□□ 0.56
LBX1P52954 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
LBX1P52954 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
LBX1P52954 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
LBX1P52954 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LBX1P52954 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC18.57■□□□□ 0.56
LBX1P52954 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
LBX1P52954 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
LBX1P52954 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
LBX1P52954 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
LBX1P52954 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
LBX1P52954 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC18.57■□□□□ 0.56
LBX1P52954 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LBX1P52954 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
LBX1P52954 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC18.57■□□□□ 0.56
LBX1P52954 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
LBX1P52954 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
LBX1P52954 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LBX1P52954 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
LBX1P52954 IGLJ3-201ENST00000390324 176 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
LBX1P52954 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC18.57■□□□□ 0.56
LBX1P52954 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC18.57■□□□□ 0.56
LBX1P52954 DEF8-202ENST00000418391 852 ntTSL 2 BASIC18.57■□□□□ 0.56
LBX1P52954 EEF1DP6-201ENST00000449232 372 ntBASIC18.57■□□□□ 0.56
LBX1P52954 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC18.57■□□□□ 0.56
LBX1P52954 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC18.57■□□□□ 0.56
LBX1P52954 PRKXP1-201ENST00000561423 1122 ntBASIC18.57■□□□□ 0.56
LBX1P52954 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC18.57■□□□□ 0.56
LBX1P52954 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
LBX1P52954 AL451050.2-201ENST00000606967 682 ntBASIC18.57■□□□□ 0.56
LBX1P52954 LARP4-220ENST00000615080 856 ntTSL 5 BASIC18.57■□□□□ 0.56
LBX1P52954 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC18.57■□□□□ 0.56
LBX1P52954 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC18.57■□□□□ 0.56
LBX1P52954 AC079336.7-201ENST00000623428 1078 ntBASIC18.57■□□□□ 0.56
LBX1P52954 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LBX1P52954 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LBX1P52954 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC18.57■□□□□ 0.56
LBX1P52954 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LBX1P52954 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
LBX1P52954 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
LBX1P52954 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
LBX1P52954 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LBX1P52954 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LBX1P52954 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
LBX1P52954 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
LBX1P52954 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.56■□□□□ 0.56
LBX1P52954 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
LBX1P52954 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LBX1P52954 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LBX1P52954 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LBX1P52954 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
LBX1P52954 C2orf27AP3-201ENST00000434123 579 ntBASIC18.56■□□□□ 0.56
LBX1P52954 AHRR-211ENST00000515206 462 ntTSL 5 BASIC18.56■□□□□ 0.56
LBX1P52954 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC18.56■□□□□ 0.56
LBX1P52954 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC18.56■□□□□ 0.56
LBX1P52954 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC18.56■□□□□ 0.56
LBX1P52954 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
LBX1P52954 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC18.56■□□□□ 0.56
LBX1P52954 AL354718.3-201ENST00000616414 581 ntBASIC18.56■□□□□ 0.56
LBX1P52954 AP001505.2-201ENST00000616815 443 ntBASIC18.56■□□□□ 0.56
LBX1P52954 CR382287.1-201ENST00000623954 586 ntBASIC18.56■□□□□ 0.56
LBX1P52954 AL158212.4-201ENST00000624062 1286 ntBASIC18.56■□□□□ 0.56
LBX1P52954 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LBX1P52954 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LBX1P52954 CROCCP3-202ENST00000420820 1947 ntBASIC18.56■□□□□ 0.56
LBX1P52954 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LBX1P52954 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LBX1P52954 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LBX1P52954 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC18.56■□□□□ 0.56
LBX1P52954 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LBX1P52954 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.55■□□□□ 0.56
LBX1P52954 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LBX1P52954 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LBX1P52954 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
LBX1P52954 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LBX1P52954 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC18.55■□□□□ 0.56
LBX1P52954 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LBX1P52954 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
LBX1P52954 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms