Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
HCFC1P51610 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
HCFC1P51610 NME2P1-201ENST00000426182 414 ntBASIC14.49□□□□□ -0.09
HCFC1P51610 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC14.49□□□□□ -0.09
HCFC1P51610 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
HCFC1P51610 AC093525.9-201ENST00000624961 1746 ntBASIC14.49□□□□□ -0.09
HCFC1P51610 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
HCFC1P51610 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC14.49□□□□□ -0.09
HCFC1P51610 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC14.49□□□□□ -0.09
HCFC1P51610 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC14.49□□□□□ -0.09
HCFC1P51610 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC14.49□□□□□ -0.09
HCFC1P51610 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
HCFC1P51610 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
HCFC1P51610 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
HCFC1P51610 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
HCFC1P51610 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
HCFC1P51610 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC14.49□□□□□ -0.09
HCFC1P51610 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC14.48□□□□□ -0.09
HCFC1P51610 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC14.48□□□□□ -0.09
HCFC1P51610 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
HCFC1P51610 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
HCFC1P51610 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HCFC1P51610 PRORSD1P-202ENST00000563365 2154 ntBASIC14.48□□□□□ -0.09
HCFC1P51610 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC14.48□□□□□ -0.09
HCFC1P51610 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
HCFC1P51610 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HCFC1P51610 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC14.48□□□□□ -0.09
HCFC1P51610 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
HCFC1P51610 DGCR5-201ENST00000399539 862 ntBASIC14.48□□□□□ -0.09
HCFC1P51610 AC079776.1-201ENST00000401540 1152 ntBASIC14.48□□□□□ -0.09
HCFC1P51610 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC14.48□□□□□ -0.09
HCFC1P51610 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC14.48□□□□□ -0.09
HCFC1P51610 GIMAP3P-201ENST00000495150 836 ntBASIC14.48□□□□□ -0.09
HCFC1P51610 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC14.48□□□□□ -0.09
HCFC1P51610 STOM-203ENST00000538954 1257 ntTSL 5 BASIC14.48□□□□□ -0.09
HCFC1P51610 AC140912.1-201ENST00000577171 1054 ntBASIC14.48□□□□□ -0.09
HCFC1P51610 SSH2-210ENST00000582084 560 ntTSL 3 BASIC14.48□□□□□ -0.09
HCFC1P51610 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HCFC1P51610 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HCFC1P51610 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
HCFC1P51610 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
HCFC1P51610 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
HCFC1P51610 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC14.48□□□□□ -0.09
HCFC1P51610 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HCFC1P51610 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HCFC1P51610 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
HCFC1P51610 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HCFC1P51610 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
HCFC1P51610 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HCFC1P51610 AC116353.5-201ENST00000638148 1699 ntBASIC14.48□□□□□ -0.09
HCFC1P51610 KRT8P49-201ENST00000604166 1432 ntBASIC14.48□□□□□ -0.09
HCFC1P51610 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC14.48□□□□□ -0.09
HCFC1P51610 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
HCFC1P51610 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC14.48□□□□□ -0.09
HCFC1P51610 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
HCFC1P51610 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HCFC1P51610 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HCFC1P51610 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC14.48□□□□□ -0.09
HCFC1P51610 HLA-H-201ENST00000383620 1096 ntBASIC14.48□□□□□ -0.09
HCFC1P51610 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC14.48□□□□□ -0.09
HCFC1P51610 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
HCFC1P51610 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HCFC1P51610 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
HCFC1P51610 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC14.48□□□□□ -0.09
HCFC1P51610 HILS1-202ENST00000545329 423 ntBASIC14.48□□□□□ -0.09
HCFC1P51610 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC14.48□□□□□ -0.09
HCFC1P51610 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC14.48□□□□□ -0.09
HCFC1P51610 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC14.48□□□□□ -0.09
HCFC1P51610 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC14.48□□□□□ -0.09
HCFC1P51610 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC14.48□□□□□ -0.09
HCFC1P51610 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC14.48□□□□□ -0.09
HCFC1P51610 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
HCFC1P51610 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
HCFC1P51610 AL133215.2-201ENST00000609242 977 ntBASIC14.48□□□□□ -0.09
HCFC1P51610 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC14.48□□□□□ -0.09
HCFC1P51610 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
HCFC1P51610 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HCFC1P51610 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HCFC1P51610 SLC9A3P2-201ENST00000447821 2021 ntBASIC14.47□□□□□ -0.09
HCFC1P51610 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
HCFC1P51610 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC14.47□□□□□ -0.09
HCFC1P51610 CETN4P-206ENST00000642099 2168 ntBASIC14.47□□□□□ -0.09
HCFC1P51610 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
HCFC1P51610 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
HCFC1P51610 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HCFC1P51610 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
HCFC1P51610 AC099398.1-201ENST00000567919 2776 ntBASIC14.47□□□□□ -0.09
HCFC1P51610 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HCFC1P51610 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HCFC1P51610 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
HCFC1P51610 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HCFC1P51610 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
HCFC1P51610 AL353705.2-201ENST00000428243 662 ntBASIC14.47□□□□□ -0.09
HCFC1P51610 U91328.1-201ENST00000437528 223 ntBASIC14.47□□□□□ -0.09
HCFC1P51610 ATP5G2P4-201ENST00000442175 420 ntBASIC14.47□□□□□ -0.09
HCFC1P51610 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC14.47□□□□□ -0.09
HCFC1P51610 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC14.47□□□□□ -0.09
HCFC1P51610 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC14.47□□□□□ -0.09
HCFC1P51610 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC14.47□□□□□ -0.09
HCFC1P51610 RAB34-223ENST00000636154 730 ntTSL 2 BASIC14.47□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms