Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RNF144AP50876 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC15.62■□□□□ 0.09
RNF144AP50876 FAM215A-202ENST00000632077 792 ntBASIC15.62■□□□□ 0.09
RNF144AP50876 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC15.62■□□□□ 0.09
RNF144AP50876 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RNF144AP50876 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
RNF144AP50876 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
RNF144AP50876 AL391256.1-201ENST00000443260 1855 ntBASIC15.62■□□□□ 0.09
RNF144AP50876 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RNF144AP50876 LINC02199-201ENST00000506655 2702 ntBASIC15.62■□□□□ 0.09
RNF144AP50876 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC15.62■□□□□ 0.09
RNF144AP50876 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
RNF144AP50876 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RNF144AP50876 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC15.62■□□□□ 0.09
RNF144AP50876 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC15.62■□□□□ 0.09
RNF144AP50876 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC15.62■□□□□ 0.09
RNF144AP50876 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RNF144AP50876 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
RNF144AP50876 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC15.61■□□□□ 0.09
RNF144AP50876 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RNF144AP50876 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC15.61■□□□□ 0.09
RNF144AP50876 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC15.61■□□□□ 0.09
RNF144AP50876 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
RNF144AP50876 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
RNF144AP50876 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RNF144AP50876 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RNF144AP50876 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RNF144AP50876 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
RNF144AP50876 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RNF144AP50876 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RNF144AP50876 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RNF144AP50876 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC15.61■□□□□ 0.09
RNF144AP50876 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
RNF144AP50876 AC073621.1-201ENST00000392730 636 ntBASIC15.61■□□□□ 0.09
RNF144AP50876 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC15.61■□□□□ 0.09
RNF144AP50876 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RNF144AP50876 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
RNF144AP50876 SLC25A6P2-201ENST00000497974 877 ntBASIC15.61■□□□□ 0.09
RNF144AP50876 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC15.61■□□□□ 0.09
RNF144AP50876 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC15.61■□□□□ 0.09
RNF144AP50876 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC15.61■□□□□ 0.09
RNF144AP50876 AC006557.2-201ENST00000592985 1240 ntBASIC15.61■□□□□ 0.09
RNF144AP50876 ABBA01031661.1-201ENST00000634362 1253 ntBASIC15.61■□□□□ 0.09
RNF144AP50876 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RNF144AP50876 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
RNF144AP50876 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC15.61■□□□□ 0.09
RNF144AP50876 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
RNF144AP50876 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
RNF144AP50876 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RNF144AP50876 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RNF144AP50876 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
RNF144AP50876 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC15.61■□□□□ 0.09
RNF144AP50876 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RNF144AP50876 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC15.61■□□□□ 0.09
RNF144AP50876 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
RNF144AP50876 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
RNF144AP50876 ALOX12P2-203ENST00000570921 1945 ntBASIC15.6■□□□□ 0.09
RNF144AP50876 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC15.6■□□□□ 0.09
RNF144AP50876 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RNF144AP50876 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RNF144AP50876 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RNF144AP50876 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RNF144AP50876 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RNF144AP50876 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RNF144AP50876 HARS-204ENST00000438307 1789 ntTSL 2 BASIC15.6■□□□□ 0.09
RNF144AP50876 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RNF144AP50876 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RNF144AP50876 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RNF144AP50876 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RNF144AP50876 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
RNF144AP50876 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
RNF144AP50876 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
RNF144AP50876 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC15.6■□□□□ 0.09
RNF144AP50876 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC15.6■□□□□ 0.09
RNF144AP50876 AC087163.2-201ENST00000457299 853 ntBASIC15.6■□□□□ 0.09
RNF144AP50876 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC15.6■□□□□ 0.09
RNF144AP50876 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC15.6■□□□□ 0.09
RNF144AP50876 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC15.6■□□□□ 0.09
RNF144AP50876 AL356488.2-201ENST00000602755 427 ntBASIC15.6■□□□□ 0.09
RNF144AP50876 AC008735.5-201ENST00000623544 497 ntBASIC15.6■□□□□ 0.09
RNF144AP50876 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
RNF144AP50876 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC15.6■□□□□ 0.09
RNF144AP50876 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
RNF144AP50876 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RNF144AP50876 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
RNF144AP50876 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RNF144AP50876 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC15.6■□□□□ 0.09
RNF144AP50876 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC15.6■□□□□ 0.09
RNF144AP50876 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RNF144AP50876 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC15.6■□□□□ 0.09
RNF144AP50876 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC15.6■□□□□ 0.09
RNF144AP50876 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
RNF144AP50876 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RNF144AP50876 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
RNF144AP50876 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
RNF144AP50876 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
RNF144AP50876 PC-204ENST00000524491 1714 ntTSL 2 BASIC15.6■□□□□ 0.09
RNF144AP50876 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
RNF144AP50876 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RNF144AP50876 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms