Protein–RNA interactions for Protein: P50613

CDK7, Cyclin-dependent kinase 7, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7P50613 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CDK7P50613 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
CDK7P50613 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDK7P50613 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
CDK7P50613 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDK7P50613 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
CDK7P50613 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDK7P50613 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDK7P50613 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDK7P50613 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDK7P50613 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
CDK7P50613 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CDK7P50613 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDK7P50613 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC18.4■□□□□ 0.54
CDK7P50613 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CDK7P50613 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
CDK7P50613 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC18.4■□□□□ 0.54
CDK7P50613 STOM-203ENST00000538954 1257 ntTSL 5 BASIC18.4■□□□□ 0.54
CDK7P50613 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC18.4■□□□□ 0.54
CDK7P50613 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC18.4■□□□□ 0.54
CDK7P50613 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC18.4■□□□□ 0.54
CDK7P50613 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC18.4■□□□□ 0.54
CDK7P50613 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CDK7P50613 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
CDK7P50613 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC18.4■□□□□ 0.54
CDK7P50613 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDK7P50613 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CDK7P50613 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDK7P50613 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
CDK7P50613 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC18.4■□□□□ 0.54
CDK7P50613 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.4■□□□□ 0.54
CDK7P50613 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDK7P50613 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDK7P50613 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDK7P50613 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.4■□□□□ 0.54
CDK7P50613 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CDK7P50613 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CDK7P50613 CETN4P-206ENST00000642099 2168 ntBASIC18.4■□□□□ 0.54
CDK7P50613 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
CDK7P50613 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC18.39■□□□□ 0.54
CDK7P50613 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.54
CDK7P50613 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDK7P50613 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDK7P50613 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
CDK7P50613 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC18.39■□□□□ 0.53
CDK7P50613 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDK7P50613 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CDK7P50613 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CDK7P50613 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDK7P50613 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDK7P50613 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
CDK7P50613 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC18.39■□□□□ 0.53
CDK7P50613 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDK7P50613 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC18.39■□□□□ 0.53
CDK7P50613 AL353705.2-201ENST00000428243 662 ntBASIC18.39■□□□□ 0.53
CDK7P50613 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CDK7P50613 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CDK7P50613 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC18.39■□□□□ 0.53
CDK7P50613 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC18.39■□□□□ 0.53
CDK7P50613 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC18.39■□□□□ 0.53
CDK7P50613 GPR53P-205ENST00000457298 1084 ntBASIC18.39■□□□□ 0.53
CDK7P50613 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC18.39■□□□□ 0.53
CDK7P50613 PRYP6-201ENST00000514804 343 ntBASIC18.39■□□□□ 0.53
CDK7P50613 IGHV3-71-201ENST00000523324 359 ntBASIC18.39■□□□□ 0.53
CDK7P50613 AC140912.1-201ENST00000577171 1054 ntBASIC18.39■□□□□ 0.53
CDK7P50613 RNA5-8SN1-201ENST00000610460 153 ntBASIC18.39■□□□□ 0.53
CDK7P50613 RNA5-8SN5-202ENST00000612463 153 ntBASIC18.39■□□□□ 0.53
CDK7P50613 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CDK7P50613 RNA5-8SN4-201ENST00000613359 153 ntBASIC18.39■□□□□ 0.53
CDK7P50613 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC18.39■□□□□ 0.53
CDK7P50613 RNA5-8SN5-201ENST00000619471 153 ntBASIC18.39■□□□□ 0.53
CDK7P50613 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC18.39■□□□□ 0.53
CDK7P50613 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
CDK7P50613 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDK7P50613 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
CDK7P50613 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CDK7P50613 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.53
CDK7P50613 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDK7P50613 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDK7P50613 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDK7P50613 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
CDK7P50613 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDK7P50613 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC18.39■□□□□ 0.53
CDK7P50613 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDK7P50613 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDK7P50613 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDK7P50613 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
CDK7P50613 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
CDK7P50613 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CDK7P50613 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDK7P50613 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC18.38■□□□□ 0.53
CDK7P50613 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC18.38■□□□□ 0.53
CDK7P50613 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
CDK7P50613 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDK7P50613 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CDK7P50613 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC18.38■□□□□ 0.53
CDK7P50613 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
CDK7P50613 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDK7P50613 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC18.38■□□□□ 0.53
CDK7P50613 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 489.7 ms