Protein–RNA interactions for Protein: P49643

PRIM2, DNA primase large subunit, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM2P49643 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PRIM2P49643 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PRIM2P49643 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PRIM2P49643 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC15.99■□□□□ 0.15
PRIM2P49643 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC15.99■□□□□ 0.15
PRIM2P49643 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC15.99■□□□□ 0.15
PRIM2P49643 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC15.99■□□□□ 0.15
PRIM2P49643 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC15.99■□□□□ 0.15
PRIM2P49643 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC15.99■□□□□ 0.15
PRIM2P49643 AC008608.2-201ENST00000606089 416 ntBASIC15.99■□□□□ 0.15
PRIM2P49643 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC15.99■□□□□ 0.15
PRIM2P49643 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PRIM2P49643 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC15.99■□□□□ 0.15
PRIM2P49643 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC15.99■□□□□ 0.15
PRIM2P49643 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
PRIM2P49643 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PRIM2P49643 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PRIM2P49643 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC15.99■□□□□ 0.15
PRIM2P49643 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PRIM2P49643 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PRIM2P49643 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PRIM2P49643 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC15.99■□□□□ 0.15
PRIM2P49643 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC15.99■□□□□ 0.15
PRIM2P49643 PAN3-AS1-201ENST00000563843 1351 ntBASIC15.99■□□□□ 0.15
PRIM2P49643 AL021920.2-201ENST00000624828 1351 ntBASIC15.99■□□□□ 0.15
PRIM2P49643 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
PRIM2P49643 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PRIM2P49643 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PRIM2P49643 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC15.98■□□□□ 0.15
PRIM2P49643 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
PRIM2P49643 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PRIM2P49643 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PRIM2P49643 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PRIM2P49643 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
PRIM2P49643 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PRIM2P49643 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
PRIM2P49643 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PRIM2P49643 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PRIM2P49643 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC15.98■□□□□ 0.15
PRIM2P49643 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PRIM2P49643 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PRIM2P49643 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PRIM2P49643 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PRIM2P49643 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PRIM2P49643 SCARNA2-201ENST00000458748 420 ntBASIC15.98■□□□□ 0.15
PRIM2P49643 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
PRIM2P49643 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PRIM2P49643 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
PRIM2P49643 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC15.98■□□□□ 0.15
PRIM2P49643 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
PRIM2P49643 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
PRIM2P49643 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC15.98■□□□□ 0.15
PRIM2P49643 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PRIM2P49643 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
PRIM2P49643 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PRIM2P49643 NORAD-201ENST00000565493 5339 ntBASIC15.98■□□□□ 0.15
PRIM2P49643 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
PRIM2P49643 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC15.98■□□□□ 0.15
PRIM2P49643 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC15.97■□□□□ 0.15
PRIM2P49643 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC15.97■□□□□ 0.15
PRIM2P49643 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PRIM2P49643 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PRIM2P49643 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PRIM2P49643 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC15.97■□□□□ 0.15
PRIM2P49643 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PRIM2P49643 AL662844.4-201ENST00000606367 2838 ntBASIC15.97■□□□□ 0.15
PRIM2P49643 AL645728.1-201ENST00000366221 2101 ntBASIC15.97■□□□□ 0.15
PRIM2P49643 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PRIM2P49643 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC15.97■□□□□ 0.15
PRIM2P49643 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PRIM2P49643 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PRIM2P49643 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC15.97■□□□□ 0.15
PRIM2P49643 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
PRIM2P49643 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
PRIM2P49643 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PRIM2P49643 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC15.97■□□□□ 0.15
PRIM2P49643 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PRIM2P49643 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
PRIM2P49643 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC15.97■□□□□ 0.15
PRIM2P49643 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC15.97■□□□□ 0.15
PRIM2P49643 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC15.97■□□□□ 0.15
PRIM2P49643 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC15.97■□□□□ 0.15
PRIM2P49643 MSRA-206ENST00000521209 814 ntTSL 3 BASIC15.97■□□□□ 0.15
PRIM2P49643 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC15.97■□□□□ 0.15
PRIM2P49643 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC15.97■□□□□ 0.15
PRIM2P49643 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC15.97■□□□□ 0.15
PRIM2P49643 IRF8-202ENST00000562492 946 ntTSL 3 BASIC15.97■□□□□ 0.15
PRIM2P49643 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC15.97■□□□□ 0.15
PRIM2P49643 AL353135.1-201ENST00000606729 504 ntBASIC15.97■□□□□ 0.15
PRIM2P49643 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC15.97■□□□□ 0.15
PRIM2P49643 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
PRIM2P49643 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
PRIM2P49643 AC006449.5-201ENST00000610658 2098 ntBASIC15.97■□□□□ 0.15
PRIM2P49643 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC15.97■□□□□ 0.15
PRIM2P49643 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
PRIM2P49643 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PRIM2P49643 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
PRIM2P49643 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PRIM2P49643 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PRIM2P49643 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms